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scnpilot_solids2_trim150_scaffold_2203

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2203_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(70..1038)
DNA (969bp) protein (323aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG4_9GAMM rbh
cation diffusion facilitator family transporter rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AGG88511.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1084..1518)
DNA (435bp) protein (145aa)
MerC mercury resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG3_9GAMM
MerC mercury resistance protein
MerC mercury resistance protein {ECO:0000313|EMBL:AGG88510.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1614..2123)
DNA (510bp) protein (170aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF2_9GAMM rbh
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EIM02044.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Fe2+/Zn2+ uptake regulation protein rbh
scnpilot_solids2_trim150_scaffold_2203_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2155..2433)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88508.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2449..3663)
DNA (1215bp) protein (405aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YKA1_METFJ
scnpilot_solids2_trim150_scaffold_2203_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4170)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLF8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88505.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4286..5446
DNA (1161bp) protein (387aa)
Glycosyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRE6_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIM02038.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_2203_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5415..5978
DNA (564bp) protein (188aa)
Lipid phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLF6_9GAMM rbh
PAP2 superfamily protein rbh
PAP2 superfamily protein {ECO:0000313|EMBL:AGG88503.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6278..7147)
DNA (870bp) protein (290aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=I4WLF5_9GAMM rbh
acetyl-CoA carboxylase carboxyltransferase subunit alpha rbh
scnpilot_solids2_trim150_scaffold_2203_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7195..7998)
DNA (804bp) protein (268aa)
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter denitrificans RepID=I4WLF4_9GAMM
scnpilot_solids2_trim150_scaffold_2203_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7995..9227)
DNA (1233bp) protein (411aa)
tryptophan synthase, beta chain (EC:4.2.1.20) rbh
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tryptophan synthase beta chain n=2 Tax=Rhodanobacter denitrificans RepID=M4NCT4_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2203_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9341..9964)
DNA (624bp) protein (208aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24) rbh
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFV5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2203_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9961..10728)
DNA (768bp) protein (256aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tRNA pseudouridine synthase A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRD9_9GAMM
pseudouridylate synthase I
scnpilot_solids2_trim150_scaffold_2203_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10832..13207)
DNA (2376bp) protein (792aa)
FimV N-terminal domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLA0_9GAMM rbh
FimV N-terminal domain protein rbh
FimV N-terminal domain protein {ECO:0000313|EMBL:AGG88496.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13383..13637)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=I4WLE8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88495.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2203_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13681..14022)
DNA (342bp) protein (114aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRD6_9GAMM
Displaying 16 items

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