ggKbase home page

scnpilot_solids2_trim150_scaffold_1979_16

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 12966..15908

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase, putative n=1 Tax=Rhodanobacter denitrificans RepID=I4WLR4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 947.0
  • Bit_score: 1651
  • Evalue 0.0
  • rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG88603.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 947.0
  • Bit_score: 1649
  • Evalue 0.0
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 947.0
  • Bit_score: 1649
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2943
ATGCTGATCCGCGACTCGCCCGTATCAAGGTTGCAGCGACCGAATCCGCCCATCTGGCTGGCCACGGGAATGCACATACTGGATCAGAACTCGACGCCGATCGATGCTGCAGCGACGCTGGCGTCCAGCGAGAGTTTCTACGCCGCGCTGTCCGAGATCGGCCAGTTGCTGGTGCGCTCGCTGGAACCGCCGATGCTGTACGAGGCGGTGATCGAGGTGCTCGAACGGCGCATCGGCGCGCGGCTGGTGATGGTGGGAGAGCTGGATCGCGCCAGCTGCCAGTGGCGACGCATCGCGCCGACGCGGGTGGCGCCCGGCATGACCGACATCTACCCCGAGTACCTCCCGTTCTCGCTGGCGCAGCCGGCGTTCTGGCGGGGCGAGCCGCAGCTGGAGGCTGACGTACGCCACGTCGATGGCCTGGAGGCGTTGCGTCCCGCCTATGCGCGGCATGGCGTGCGCGCGGTGGTCGCCGTGCCGGTGCTGAAGTTCGGCGAGGTGTGCGCAGCGCTGCTGATACGGGCCTCGCAGGCCGGTTTTTTCTCGGTGCGGATGATCGAGTTGCTGCAGCAGGCAGCGGCCAGCATCGGCCTGGGGCTGGAGACGTGCGAACAACGCGAGCGGCTGCTGCAGTCGGTGCAGGACGAGGCGCGTCAGCGCCATGCATTGCGACTGCTCAGCGAGATGGTCAAGCTGGTTGCCCACAGCGCGGACGAAGCGGCGCTGCTGGCCGGCGCCTGTCGGGTGGTGCGAGGTATCGGTGGTTACCGCGTGGCCTGGATCGGCCTTTGCGAGGAGGACGACCCGACGGTCTTGCGCATACGGGCGCAGGAGGGGCTGGCTGACGATGCGGCGGATGCCTGCTTCGTCCCGGCCGAGCATGCGCATGCCGGCAATGCGGTGACGCGTGCGCTGTCCACCGGCGAGGCGCAGATCGGCCGCGCCGCGGCAGCGGAACTGCTGCCATGGGCGCCTGGCGCGGGCCTGTCCGGCATGCGTGCGCTGCTGGCGTTGCCGTTGCGGGTGGACGGGGCGGTCATGGGTTGCCTGGTCATCGGCGCGGACGCGGCCGATGCGTTCGGTGCGGTCGAAACCCGGGTTTTTGCGGAAATGGCGGTCGAGCTGAGCCTTGGTATCCGGATGCAGCGCGCGCAGGCGGCCCGCCTGACGGCCGAACGCGATCTGCGCTTCAGCCTGCATTACTTCCGCACCATCCTGTCACGGCAGCACGCGGGCATCGTGGTGATGTCCGAAGACCGTCGGGTGAGTTTCGCCAACGAGGCGTTCTGCACGCTGTTCGGTCTGTCCGAGACGCCGGCGGAACTGGAAGGCTTGCCGGCGGAAGCGATCCACGAGCGGCTGAGCCGGGCCTGTGCGGATCCGGGGCACCAGTCGCGCCGGATGCAGGAGATCCTGGCCCGGGGCGAGCCGGTCGAGGGCGACGAGGTGGCAATGGAGGACGGACGCACCTTCCTGCGCGATTTCACCCCGATCCGGATCGATGGCCTGCAGCAGGGGTGGCTGTGGCACCAGCGCGACGTCACCGGGCAGAAGATGCACGAGGCGCGGGTCGAGCGGCTGGCCTTCTACGACGTGGTCACCGGCCTGCCTAACCGGCGGCTGCTGTTCGATCTGCTGGAGCAGGCACGCGCGCGGGCCATCGAGCAAGGCGCGCTGCTGGCGGTCGGCGTGCTCGATCTGGACCGCTTCAAGAGCGTCAACGACAGCGTCGGCCACGGCGGCGGCGACTGCGTGCTGGCGGAGGCCTCGGCGCGGATCCTCGGCATGCTGCGCGAAGCGGACGTGCTGGCCCGCTTCGGCGGCGACGAATTCGCGCTGGTGATCGCCGGCCTGGACAGCCGCGAACAGCTTGACGTGATCAGCCGCTGCATCCTGCAGGCGCTGCGGGCGCCGTTCAACCTGATGGGCGAGCAGCTGTACCTGTCCGCCAGCGTGGGCTGGACCCTGTTTCCGCTGGACGGGTCCGACGGGGAGGGCCTGGTGCGGCATGCCGACCTGGCGATGTATGCGGCCAAGGAGGAGGGCAAGGACCGCGGCTCGCTGTACGAGCCGGTGATGGAGCTGGAGCAGTTGCGGCTGCAGGCGATGCGCGAGCGGATCGCCCAGGCGCTCAAGCGCTCGCACCTGCAGTTGCTGTTCCAGCCGATCGTCTACATCGACGGTTTGCCCGGCCTGCACGGCGTGGCCGGGATGGAGGCGTTGCTGCGTCTGGGCGACACCGACGAACTGATCGAACCGGCGAAGTTCATGCACGTGCTGGACGATCCGCAGCTGGCCCGGCCGATCGGTCGCTACGTGCTGGACGAGGCGCTGCGCTGCTGCCAGTCGTGGATGCGCTCGGGCATCTCGATTCCGGTCTCGATCAACATCAGCACCCGCCACCTGCTGCACCCGGCGTTTTTCATCGATATCGACGCGGTGCTGGAGAATTACCCGGGCGTGATGGACGTGGGTTTCGGCATCGAGGTGACCGAAACCGGCCCGTCGATGGACCATGCGCGCGCCAAGGTCGTGATCGAGGAGTGCCGCCGGCGCGGCATCCGCGTCGGCCTGGACGATTTCGGTACCGGCAGCGCCTCGCTGAGTCATATCCAGAAACTCGACATCGAGCACATCAAGCTCGACCAGAGCTTCGTGCGCGACATCCTCGACGACGAGCGCAACATGGCGATCGCGGCCGGGGTGATCACCACCGCGCGCATGCTGGCCAAGACGGTGATCGCCGAAGGCGTCGAGACGGCGGAGCAGGGCGACTTGCTGGCCTCGCTGGGCTGCCATCAGCTGCAGGGTTTCTCGATCTCCCGGCCGATGCCGGCCGAGGCGGTGCCGGGCTGGGTCGCCGGCTGGGTGCCGCCGGCGTCGTGGAACAGCCTGGTCAACGAGCGCCGGTCGCTGCTGGCCAGCCAGACGGACGGAGCCTGA
PROTEIN sequence
Length: 981
MLIRDSPVSRLQRPNPPIWLATGMHILDQNSTPIDAAATLASSESFYAALSEIGQLLVRSLEPPMLYEAVIEVLERRIGARLVMVGELDRASCQWRRIAPTRVAPGMTDIYPEYLPFSLAQPAFWRGEPQLEADVRHVDGLEALRPAYARHGVRAVVAVPVLKFGEVCAALLIRASQAGFFSVRMIELLQQAAASIGLGLETCEQRERLLQSVQDEARQRHALRLLSEMVKLVAHSADEAALLAGACRVVRGIGGYRVAWIGLCEEDDPTVLRIRAQEGLADDAADACFVPAEHAHAGNAVTRALSTGEAQIGRAAAAELLPWAPGAGLSGMRALLALPLRVDGAVMGCLVIGADAADAFGAVETRVFAEMAVELSLGIRMQRAQAARLTAERDLRFSLHYFRTILSRQHAGIVVMSEDRRVSFANEAFCTLFGLSETPAELEGLPAEAIHERLSRACADPGHQSRRMQEILARGEPVEGDEVAMEDGRTFLRDFTPIRIDGLQQGWLWHQRDVTGQKMHEARVERLAFYDVVTGLPNRRLLFDLLEQARARAIEQGALLAVGVLDLDRFKSVNDSVGHGGGDCVLAEASARILGMLREADVLARFGGDEFALVIAGLDSREQLDVISRCILQALRAPFNLMGEQLYLSASVGWTLFPLDGSDGEGLVRHADLAMYAAKEEGKDRGSLYEPVMELEQLRLQAMRERIAQALKRSHLQLLFQPIVYIDGLPGLHGVAGMEALLRLGDTDELIEPAKFMHVLDDPQLARPIGRYVLDEALRCCQSWMRSGISIPVSINISTRHLLHPAFFIDIDAVLENYPGVMDVGFGIEVTETGPSMDHARAKVVIEECRRRGIRVGLDDFGTGSASLSHIQKLDIEHIKLDQSFVRDILDDERNMAIAAGVITTARMLAKTVIAEGVETAEQGDLLASLGCHQLQGFSISRPMPAEAVPGWVAGWVPPASWNSLVNERRSLLASQTDGA*