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scnpilot_solids2_trim150_scaffold_1979

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1979_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH9_9GAMM
MoxR-like ATPase {ECO:0000313|EMBL:EIL99970.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MoxR-like ATPase
scnpilot_solids2_trim150_scaffold_1979_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(451..1047)
DNA (597bp) protein (199aa)
Maf-like protein UUC_14235 n=1 Tax=Rhodanobacter denitrificans RepID=I4WLP9_9GAMM rbh
MAF protein rbh
Maf-like protein R2APBS1_1442 {ECO:0000256|HAMAP-Rule:MF_00528}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1044..1499)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLQ0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88589.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1685..2158
DNA (474bp) protein (158aa)
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLQ1_9GAMM
putative metal-binding protein, possibly nucleic-acid binding protein
Putative metal-binding protein, possibly nucleic-acid binding protein {ECO:0000313|EMBL:AGG88590.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2523..3497
DNA (975bp) protein (325aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhodanobacter denitrificans RepID=I4WLQ3_9GAMM rbh
3-oxoacyl-(acyl-carrier-protein) synthase III rbh
scnpilot_solids2_trim150_scaffold_1979_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3598..4581
DNA (984bp) protein (328aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH3_9GAMM
malonyl CoA-acyl carrier protein transacylase rbh
scnpilot_solids2_trim150_scaffold_1979_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4616..5335
DNA (720bp) protein (240aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EIL99963.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EIL99963.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH2_9GAMM
scnpilot_solids2_trim150_scaffold_1979_8
unknown

Not on your lists

5530..5628
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1979_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5867..7105
DNA (1239bp) protein (413aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WLQ7_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1979_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7120..8466
DNA (1347bp) protein (449aa)
Anthranilate/para-aminobenzoate synthase component I n=1 Tax=Rhodanobacter denitrificans RepID=M4NF27_9GAMM rbh
anthranilate/para-aminobenzoate synthase component I rbh
Anthranilate/para-aminobenzoate synthase component I {ECO:0000313|EMBL:AGG88597.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..9293
DNA (828bp) protein (276aa)
aminodeoxychorismate lyase apoprotein (EC:4.1.3.38) rbh
Aminodeoxychorismate lyase apoprotein {ECO:0000313|EMBL:AGG88598.1}; EC=4.1.3.38 {ECO:0000313|EMBL:AGG88598.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
4-amino-4-deoxychorismate lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLQ9_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1979_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9290..10327
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKG7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99958.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1979_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10324..10965
DNA (642bp) protein (214aa)
thymidylate kinase (EC:2.7.4.9) rbh
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Thymidylate kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND06_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1979_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10962..11897
DNA (936bp) protein (312aa)
DNA polymerase III, delta'' subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NLI9_9GAMM rbh
DNA polymerase III, delta'' subunit rbh
DNA polymerase III, delta'' subunit {ECO:0000313|EMBL:AGG88601.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11888..12886
DNA (999bp) protein (333aa)
Putative LmbE-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NF30_9GAMM rbh
putative LmbE-like protein rbh
Putative LmbE-like protein {ECO:0000313|EMBL:AGG88602.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12966..15908
DNA (2943bp) protein (981aa)
Diguanylate cyclase, putative n=1 Tax=Rhodanobacter denitrificans RepID=I4WLR4_9GAMM rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG88603.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_1979_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16018..16371
DNA (354bp) protein (118aa)
Tfp pilus assembly protein PilZ n=1 Tax=Rhodanobacter denitrificans RepID=I4WLR5_9GAMM
Tfp pilus assembly protein PilZ
Tfp pilus assembly protein PilZ {ECO:0000313|EMBL:AGG88604.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1979_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16642..16998
DNA (357bp) protein (119aa)
NADH:ubiquinone oxidoreductase subunit 3 (chain A) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Rhodanobacter denitrificans RepID=I4WLR6_9GAMM
scnpilot_solids2_trim150_scaffold_1979_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16989..17345
DNA (357bp) protein (119aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Rhodanobacter denitrificans RepID=I4WLR7_9GAMM
Displaying 19 items

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