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scnpilot_solids2_trim150_scaffold_1741_16

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(11692..12273)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 193.0
  • Bit_score: 341
  • Evalue 6.30e-91
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 193.0
  • Bit_score: 342
  • Evalue 2.00e-91
  • rbh
16S rRNA m(2)G-966 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 193.0
  • Bit_score: 341
  • Evalue 1.40e-91
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAACGGCGGGCGCCGGGCCGCGTCGGGGCGCATCCGCATCATCGGCGGCAGCCTGCGCAATTCGCGGCTGGAGGTGCCGGAGCTGCCCGGCCTGCGGCCCACCCCCGAGCGGGTGCGCGAAACCCTGTTCAACTGGCTGGCGCCGGTGCTCGAGGGCGCGCGCTGCCTGGACCTGTGCGCGGGCACCGGCGCGCTCGGCATCGAGGCGCTGTCGCGCGGGGCAGCCGGCGTGCAGCTCGTCGAGCGCGACGCGCGCGCCGCACAGGCCTTGCGCGCGAACCTGGCGCGGCTCAAGGCCGACGGCGGCCAGGTGGCCGCGCTGGATGCGGTGGCGTTCCTGCAGGGCGCGGCGCAACCGTACGACCTGGTCTTCCTCGACCCGCCGTTCGCGCTGGAGCTGTGGCCGACGCTGGCGCGGCAGATCGAGCAGGGCGGCTGGCTGGCCGCGCCGGGCTGGATCTACGTGGAGTCGCCGCGCGGCCACGTGCCGGCGCTGCCGGCGAACTGGCGACTGCACCGCGAGGGTCAGGCCGGCGAGGTGCGCTTTGCGCTCTATCGGCGCGCGCTTCCGTTAAGCTAG
PROTEIN sequence
Length: 194
MNGGRRAASGRIRIIGGSLRNSRLEVPELPGLRPTPERVRETLFNWLAPVLEGARCLDLCAGTGALGIEALSRGAAGVQLVERDARAAQALRANLARLKADGGQVAALDAVAFLQGAAQPYDLVFLDPPFALELWPTLARQIEQGGWLAAPGWIYVESPRGHVPALPANWRLHREGQAGEVRFALYRRALPLS*