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scnpilot_solids2_trim150_scaffold_1741

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1741_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..378)
DNA (378bp) protein (126aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR9_9GAMM
flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(378..782)
DNA (405bp) protein (135aa)
Flagellar basal body rod protein FlgB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRY2_9GAMM
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar basal-body rod protein FlgB
scnpilot_solids2_trim150_scaffold_1741_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(951..1889)
DNA (939bp) protein (313aa)
Chemotaxis signal transduction protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ0_9GAMM
chemotaxis signal transduction protein
Chemotaxis signal transduction protein {ECO:0000313|EMBL:AGG90091.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2087..3391
DNA (1305bp) protein (435aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ26_9GAMM
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG90092.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3388..4119
DNA (732bp) protein (244aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ2_9GAMM
flagella basal body P-ring formation protein FlgA
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4229..4552
DNA (324bp) protein (108aa)
Anti-sigma-28 factor FlgM n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ3_9GAMM
flagellar biosynthesis anti-sigma factor FlgM
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:AGG90094.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4549..4995
DNA (447bp) protein (149aa)
Flagellar biosynthesis/type III secretory pathway chaperone n=1 Tax=Rhodanobacter denitrificans RepID=M4NGM3_9GAMM
flagellar biosynthesis/type III secretory pathway chaperone
Flagellar biosynthesis/type III secretory pathway chaperone {ECO:0000313|EMBL:AGG90095.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5102..6385
DNA (1284bp) protein (428aa)
Putative signal transduction protein containing EAL and modified HD-GYP domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NRA7_9GAMM
putative signal transduction protein containing EAL and modified HD-GYP domains
Putative signal transduction protein containing EAL and modified HD-GYP domains {ECO:0000313|EMBL:AGG90096.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6414..7451)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ6_9GAMM
Protein of unknown function (DUF1625)
Uncharacterized protein {ECO:0000313|EMBL:AGG90097.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7451..8323)
DNA (873bp) protein (291aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ7_9GAMM
Zn-dependent hydrolase, glyoxylase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG90098.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8325..8480)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90099.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8491..10215)
DNA (1725bp) protein (575aa)
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltransferase 1 {ECO:0000313|EMBL:AGG90100.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AGG90100.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ8_9GAMM
scnpilot_solids2_trim150_scaffold_1741_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10212..10472)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90101.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10618..11121)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90102.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1741_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11114..11665)
DNA (552bp) protein (184aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3) rbh
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR1_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1741_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11692..12273)
DNA (582bp) protein (194aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM rbh
16S rRNA m(2)G-966 methyltransferase rbh
scnpilot_solids2_trim150_scaffold_1741_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12348..13364
DNA (1017bp) protein (339aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR3_9GAMM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 17 items

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