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scnpilot_solids2_trim150_scaffold_2855_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(1676..1999)

Top 3 Functional Annotations

Value Algorithm Source
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 107.0
  • Bit_score: 201
  • Evalue 3.10e-49
Factor for inversion stimulation Fis, transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 107.0
  • Bit_score: 201
  • Evalue 9.80e-50
Factor for inversion stimulation Fis, transcriptional activator {ECO:0000313|EMBL:AGG87512.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 107.0
  • Bit_score: 201
  • Evalue 4.40e-49

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTCCGTGAATGCCGTAAGACTGCCAGCTGCCGAGGCCTCGAAACAGGCCTCGTTGCAGGGCACGGGTTCGCCCGGCGCCGGCCTCCAGGGCCAGAGTGCGCTGAGCGAATGCGTCACCCGCATGGTGCGCCGCTACCTTGCCGACATCGGCGACACCGAATGCGCCGAAGGTCTGCACGCGCTGGTGCTGCACGAAGTCGAGGTGCCGCTGCTGCGCGAGGTGCTGGCCTTCCATAACGGCAACCAGAGCCGCGCCGCCAGCGCGCTCGGCATCAATCGCGCCACCTTGCGCAAGAAGCTGGCCGCACACGGCCTGCTGTAA
PROTEIN sequence
Length: 108
MSVNAVRLPAAEASKQASLQGTGSPGAGLQGQSALSECVTRMVRRYLADIGDTECAEGLHALVLHEVEVPLLREVLAFHNGNQSRAASALGINRATLRKKLAAHGLL*