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scnpilot_solids2_trim150_scaffold_2855

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2855_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(57..815)
DNA (759bp) protein (253aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT9_9GAMM
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
scnpilot_solids2_trim150_scaffold_2855_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(812..1594)
DNA (783bp) protein (261aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rhodanobacter denitrificans RepID=M4NI91_9GAMM
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2855_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1676..1999)
DNA (324bp) protein (108aa)
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM
Factor for inversion stimulation Fis, transcriptional activator
Factor for inversion stimulation Fis, transcriptional activator {ECO:0000313|EMBL:AGG87512.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2855_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2156..3016)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK3_9GAMM rbh
Protein of unknown function (DUF3426) rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87513.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2855_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3125..4042)
DNA (918bp) protein (306aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(LSU ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-) rbh
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAU2_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2855_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4109..5485)
DNA (1377bp) protein (459aa)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL3_9GAMM
acetyl-CoA carboxylase, biotin carboxylase subunit
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:AGG87515.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2855_7
unknown

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comp(5489..5773)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2855_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5779..6249)
DNA (471bp) protein (157aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:EIL89250.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EIL89250.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL4_9GAMM
biotin carboxyl carrier protein
scnpilot_solids2_trim150_scaffold_2855_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6325..6777)
DNA (453bp) protein (151aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-dehydroquinate dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL5_9GAMM
scnpilot_solids2_trim150_scaffold_2855_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6910..7446)
DNA (537bp) protein (179aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK7_9GAMM rbh
thiol-disulfide isomerase-like thioredoxin rbh
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGG87518.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2855_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7446..9098)
DNA (1653bp) protein (551aa)
C-type cytochrome biogenesis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL7_9GAMM
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AGG87519.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2855_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9884..10915
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EE4539 rbh
PHP-like metal-dependent phosphoesterase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2855_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10938..11834)
DNA (897bp) protein (299aa)
Transmembrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL8_9GAMM rbh
putative permease, DMT superfamily rbh
Transmembrane protein {ECO:0000313|EMBL:EIL96590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2855_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11895..12326)
DNA (432bp) protein (144aa)
Periplasmic divalent cation tolerance protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAV0_9GAMM
Periplasmic divalent cation tolerance protein {ECO:0000313|EMBL:EIL96591.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized protein involved in tolerance to divalent cations
Displaying 14 items

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