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scnpilot_solids2_trim150_scaffold_136

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Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_136_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1073
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK40_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28789.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_136_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1134..2432
DNA (1299bp) protein (433aa)
sgaA2; serine--glyoxylate aminotransferase SgaA (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] rbh
Aminotransferase class V n=1 Tax=Afipia sp. 1NLS2 RepID=D6V571_9BRAD rbh
Aminotransferase class V {ECO:0000313|EMBL:EFI51468.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_136_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2506..3498
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V572_9BRAD rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEG08570.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_136_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3604..4155
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V573_9BRAD rbh
Tripartite tricarboxylate transporter TctB family protein {ECO:0000313|EMBL:CEG08569.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_136_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4168..5679
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V574_9BRAD rbh
Tripartite tricarboxylate transporter TctA family protein {ECO:0000313|EMBL:CEG08568.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative transmembrane protein rbh
scnpilot_solids2_trim150_scaffold_136_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5832..6533
DNA (702bp) protein (234aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V575_9BRAD rbh
DNA-binding transcriptional repressor AcrR {ECO:0000313|EMBL:CEG08567.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative TetR family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_136_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6535..7743
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V576_9BRAD rbh
Multidrug transporter MdtA {ECO:0000313|EMBL:CEG08566.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
membrane fusion protein rbh
scnpilot_solids2_trim150_scaffold_136_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7906..10989
DNA (3084bp) protein (1028aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDW6_AFIFE rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS28782.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
acriflavin resistance protein rbh
scnpilot_solids2_trim150_scaffold_136_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11374..12738
DNA (1365bp) protein (455aa)
Tetratricopeptide TPR_2 peptide n=1 Tax=Afipia sp. 1NLS2 RepID=D6V579_9BRAD rbh
Tetratricopeptide TPR_2 peptide {ECO:0000313|EMBL:EFI51476.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_136_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12750..13706
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V580_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51477.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_136_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13801..15321
DNA (1521bp) protein (507aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glpD; glycerol-3-phosphate dehydrogenase GlpD (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
Glycerol-3-phosphate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V581_9BRAD rbh
scnpilot_solids2_trim150_scaffold_136_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15400..16254
DNA (855bp) protein (285aa)
Aldo/keto reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V582_9BRAD rbh
Aldo/keto reductase {ECO:0000313|EMBL:EFI51479.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
aldo/keto reductase family protein rbh
scnpilot_solids2_trim150_scaffold_136_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16363..16617)
DNA (255bp) protein (85aa)
Protein SlyX homolog n=1 Tax=Afipia sp. 1NLS2 RepID=D6V583_9BRAD
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SlyX family protein; K03745 SlyX protein
scnpilot_solids2_trim150_scaffold_136_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16571..17326)
DNA (756bp) protein (252aa)
UPF0176 protein AfiDRAFT_1767 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V584_9BRAD rbh
UPF0176 protein AfiDRAFT_1767 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rhodanese-like domain-containing protein; K07146 UPF0176 protein rbh
scnpilot_solids2_trim150_scaffold_136_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17383..18201)
DNA (819bp) protein (273aa)
Protein FdhD homolog n=1 Tax=Afipia sp. 1NLS2 RepID=D6V585_9BRAD rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
FdhD family protein; K02379 FdhD protein rbh
scnpilot_solids2_trim150_scaffold_136_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18390..19979
DNA (1590bp) protein (530aa)
Radical SAM domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V586_9BRAD rbh
B12-binding domain/radical SAM domain protein, family {ECO:0000313|EMBL:CEG08553.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
methylthiotransferase rbh
scnpilot_solids2_trim150_scaffold_136_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20168..21046
DNA (879bp) protein (293aa)
Squalene synthase HpnC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V587_9BRAD rbh
Squalene synthase HpnC {ECO:0000313|EMBL:CEG08552.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative squalene/phytoene synthase rbh
scnpilot_solids2_trim150_scaffold_136_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21054..21881
DNA (828bp) protein (276aa)
Squalene synthase HpnD {ECO:0000313|EMBL:EFI51485.1}; EC=2.5.1.32 {ECO:0000313|EMBL:EFI51485.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative squalene/phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32] rbh
Squalene synthase HpnD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V588_9BRAD rbh
scnpilot_solids2_trim150_scaffold_136_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21881..23146
DNA (1266bp) protein (422aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V589_9BRAD rbh
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EFI51486.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hpnE; squalene-associated FAD-dependent desaturase rbh
scnpilot_solids2_trim150_scaffold_136_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23160..25121
DNA (1962bp) protein (654aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] rbh
Squalene-hopene cyclase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK24_AFIFE rbh
Squalene-hopene cyclase {ECO:0000313|EMBL:EKS28769.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_136_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25127..25846
DNA (720bp) protein (240aa)
Hopanoid-associated phosphorylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V591_9BRAD rbh
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:CEG08548.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_136_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26017..27207)
DNA (1191bp) protein (397aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Afipia sp. 1NLS2 RepID=D6V593_9BRAD rbh
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EFI51490.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
radical SAM domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_136_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27226..28230)
DNA (1005bp) protein (335aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V594_9BRAD rbh
scnpilot_solids2_trim150_scaffold_136_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28196..30112)
DNA (1917bp) protein (639aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
dxs2; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V595_9BRAD rbh
scnpilot_solids2_trim150_scaffold_136_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30349..32931
DNA (2583bp) protein (861aa)
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V596_9BRAD rbh
Hopanoid biosynthesis associated RND transporter like protein HpnN {ECO:0000313|EMBL:CEG08543.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hpnN; hopanoid biosynthesis associated RND transporter like protein HpnN; K07003 rbh
scnpilot_solids2_trim150_scaffold_136_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32881..33498)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V597_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG08542.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_136_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33623..35014
DNA (1392bp) protein (464aa)
class III aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] rbh
Aminotransferase class-III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V598_9BRAD rbh
Aminotransferase class-III {ECO:0000313|EMBL:EFI51495.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_136_28
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35367..35603)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NML9_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06122.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_136_29
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35762..37381)
DNA (1620bp) protein (540aa)
glucose-methanol-choline oxidoreductase (EC:1.1.99.-) rbh
Glucose-methanol-choline oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A1_9BRAD rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EFI51498.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_136_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37511..38686
DNA (1176bp) protein (392aa)
Amidohydrolase {ECO:0000313|EMBL:EFI51499.1}; EC=3.5.1.32 {ECO:0000313|EMBL:EFI51499.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] rbh
Amidohydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A2_9BRAD rbh
Displaying items 1-30 of 100 in total

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