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scnpilot_solids2_trim150_scaffold_136_36

Organism: SCNPILOT_SOLID2_TRIM150_Phage_6

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 47776..48327

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 182.0
  • Bit_score: 328
  • Evalue 4.90e-87
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI51505.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 182.0
  • Bit_score: 328
  • Evalue 6.90e-87
RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 182.0
  • Bit_score: 317
  • Evalue 2.10e-84
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGCGCGGCCAGGAACAGGAATGGACCGACCTGATGCGGTCGGCGAGCGCGGGGGATGTCGCCGCCTACCATCGGCTCCTGTCGGCCATCACGCCGGTCTTGCGAGCGGCGGCGCGGCGCGGCCTGCTGCGCGCCGGGCAATCGCCTGATCAGTCCGAGGATATCGTGCAGGATACTTTGCTCGCCGTGCATCTGAAACGGCACACATGGGATTCGAACGCGGCGTTCGCGCCGTGGTTGTTCACGATCGCGCGTAACAAGCTGATCGACGCGCTGCGCCGCCGCGGCCGCCGCGTGTTCGTCGACATCGACGATTTCACCGACGTGCTGCCCGGCGAGGACGCACCCGAGCCGGCCAGCGGCGTGGACATCGAGGCGCATCTGAAGACGCTGCCGCAGCGCCAGCGCGATGTGCTGCAATCGATCTCGGTCGACGGCCTGTCGATTGCCGAGACGGCTAGGAAGTTTGACATCAAGGAAGGTGCGGTGCGGGTGGCGCTGCACCGTGGACTCGCGGCGCTCGCGGCGCGCGCCCGGAATGATCTGACATGA
PROTEIN sequence
Length: 184
VRGQEQEWTDLMRSASAGDVAAYHRLLSAITPVLRAAARRGLLRAGQSPDQSEDIVQDTLLAVHLKRHTWDSNAAFAPWLFTIARNKLIDALRRRGRRVFVDIDDFTDVLPGEDAPEPASGVDIEAHLKTLPQRQRDVLQSISVDGLSIAETARKFDIKEGAVRVALHRGLAALAARARNDLT*