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scnpilot_solids2_trim150_scaffold_136_40

Organism: SCNPILOT_SOLID2_TRIM150_Phage_6

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 51571..52140

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI79_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 189.0
  • Bit_score: 325
  • Evalue 3.30e-86
  • rbh
RNA polymerase sigma factor CarQ {ECO:0000313|EMBL:CEG08526.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 189.0
  • Bit_score: 328
  • Evalue 7.10e-87
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 189.0
  • Bit_score: 299
  • Evalue 6.00e-79

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGAGTGCAACACCGGCCGCATCGGATGAATCGCTGATCGGCCGCATTGCCCTGGGCGATCGCCTCGCCATGCAGGTTCTCTACGGACGGCACCATGTCCGCGTTTATCGGTTCGCATTGCGTCTGGTGCGTCAGGAACAGGTCGCCGAGGACCTCATCAGCGAGGTGTTTCTGGATGCATGGCGTCAGGCCGGGCAGTTCGAAGGGCGTTCCACCGTCTCGACCTGGCTGCTGGCGATCACGAGATTCAAGGCGTTGTCGGCGCTGCGCAACAAGAAGGACGCAGAACTCGACGACAAAACGGCAGCGGCGATCGAGGACACGGCCGGCGATCCGGGGGCCATGATCGCCAGGAAGGATACCGGGAAGGTGCTGCGCAATTGTCTGGCAAGGCTGTCGCGGGACCATCGCGAGATTGTCGATCTCGTCTACTACCACGAGAAGTCCGTGGAGGAGGTCGCCAGGATCGTCGGTATCCCGGAGAACACAGTGAAGACGCGCCTGTTCGACGCGCGCAAGAAACTGGCCGAACTTCTGAACGAAGCCGGCGTGGAGCGAGGCTGGCCATGA
PROTEIN sequence
Length: 190
LSATPAASDESLIGRIALGDRLAMQVLYGRHHVRVYRFALRLVRQEQVAEDLISEVFLDAWRQAGQFEGRSTVSTWLLAITRFKALSALRNKKDAELDDKTAAAIEDTAGDPGAMIARKDTGKVLRNCLARLSRDHREIVDLVYYHEKSVEEVARIVGIPENTVKTRLFDARKKLAELLNEAGVERGWP*