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scnpilot_solids2_trim150_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_398_1
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1096)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AN87_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14339.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
plasmid replication/partition protein
scnpilot_solids2_trim150_scaffold_398_2
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1093..1848)
DNA (756bp) protein (252aa)
Plasmid replication protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAN7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:AKH22394.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
plasmid replication protein; K03496 chromosome partitioning protein
scnpilot_solids2_trim150_scaffold_398_3
unknown

Not on your lists

comp(2065..2301)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2367..2726)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48699.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
scnpilot_solids2_trim150_scaffold_398_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2901..3182)
DNA (282bp) protein (94aa)
Helix-turn-helix type 3 domain protein n=1 Tax=mine drainage metagenome RepID=T0ZXN3_9ZZZZ
XRE family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_398_6
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3179..3505)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Xylella fastidiosa RepID=B2I506_XYLF2
Phage-related protein {ECO:0000313|EMBL:AHE65819.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_398_7
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4325..4825)
DNA (501bp) protein (167aa)
Conjugal transfer protein n=2 Tax=Xylella fastidiosa RepID=Q9PHK3_XYLFA
conjugal transfer protein; K03194 type IV secretion system protein VirB1
Conjugal transfer protein {ECO:0000313|EMBL:AAF85571.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids2_trim150_scaffold_398_8
unknown

Not on your lists

5249..5560
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_9
unknown

Not on your lists

5574..5900
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_10
unknown

Not on your lists

5900..6196
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_11
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

6174..8513
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3C75B rbh
VirB4 {ECO:0000313|EMBL:ERJ32794.1}; TaxID=1242965 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW2.;"
VirB4; K03199 type IV secretion system protein VirB4
scnpilot_solids2_trim150_scaffold_398_12
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8476..9243
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BWD9_DESAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS78383.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
scnpilot_solids2_trim150_scaffold_398_13
unknown

Not on your lists

9255..9563
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_14
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9567..10559
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B73E34
TrbL/VirB6 plasmid conjugal transfer protein; K03201 type IV secretion system protein VirB6
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ACS78384.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
scnpilot_solids2_trim150_scaffold_398_15
unknown

Not on your lists

10556..10693
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_16
Helicobacter trogontum, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10680..11303
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3A4A0
Virulence protein {ECO:0000313|EMBL:KGL30166.1}; TaxID=50960 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter trogontum.;"
vblB8; type IV secretion protein VblB8
scnpilot_solids2_trim150_scaffold_398_17
Wolinella succinogenes, Wolinella, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11300..12211
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6AA81
COMB2; hypothetical protein; K03204 type IV secretion system protein VirB9
COMB2 {ECO:0000313|EMBL:CAE10189.1}; TaxID=273121 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Wolinella.;" source="Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC; 11488 / FDC 602W) (Vibrio succinogenes).;"
scnpilot_solids2_trim150_scaffold_398_18
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12216..13295
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4B088
virB10-1; VirB10 type IV secretion protein; K03195 type IV secretion system protein VirB10
TrbI protein {ECO:0000313|EMBL:AHG28758.1}; TaxID=28197 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri.;"
scnpilot_solids2_trim150_scaffold_398_19
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13292..15193
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B44542 rbh
Secreted protein {ECO:0000313|EMBL:GAK46657.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids2_trim150_scaffold_398_20
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15196..16170
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B38BE4
Type IV secretion system protein virB11 {ECO:0000313|EMBL:AIL65065.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
virB; type IV secretion system ATPase VirB11; K03196 type IV secretion system protein VirB11
scnpilot_solids2_trim150_scaffold_398_21
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16167..17789
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6676D rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:ESZ86677.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
scnpilot_solids2_trim150_scaffold_398_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17834..18559
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AEFDB
Uncharacterized protein {ECO:0000313|EMBL:KJZ41721.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_398_23
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18651..19346)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T1J4_BURPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD14723.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
scnpilot_solids2_trim150_scaffold_398_24
unknown

Not on your lists

comp(19343..19486)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_398_25
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19762..20067
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW83_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGF33138.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
Protein of unknown function DUF2136
scnpilot_solids2_trim150_scaffold_398_26
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20071..20445
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQY2_STEMA
Helix-turn-helix motif protein {ECO:0000313|EMBL:BAP88448.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_398_27
Acinetobacter sp. WC-743, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20510..21409
DNA (900bp) protein (300aa)
Integrase core domain protein n=1 Tax=Acinetobacter sp. WC-743 RepID=L9MD30_9GAMM rbh
Integrase core domain protein {ECO:0000313|EMBL:ELW85155.1}; TaxID=903945 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. WC-743.;"
integrase rbh
scnpilot_solids2_trim150_scaffold_398_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21445..22446)
DNA (1002bp) protein (334aa)
Phage integrase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7G4_NITMU
Integrase {ECO:0000313|EMBL:KIO48710.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Phage integrase
scnpilot_solids2_trim150_scaffold_398_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22590..22934
DNA (345bp) protein (115aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIA2_9PROT
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIO49024.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
arsR; transcription regulator protein, arsenical resistance operon repressor
scnpilot_solids2_trim150_scaffold_398_30
unknown

Not on your lists

22958..23068
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

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