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scnpilot_solids2_trim150_scaffold_991

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_991_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138..965
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8L9A7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AIJ47425.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_991_2
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1044..3092
DNA (2049bp) protein (683aa)
Putative chromosome segregation protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WVN4_PSEDE
putative chromosome segregation protein
Putative chromosome segregation protein {ECO:0000313|EMBL:AGI23844.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
scnpilot_solids2_trim150_scaffold_991_3
unknown

Not on your lists

comp(3322..3423)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_991_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3850..4164
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8EIH0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:GAO26417.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_991_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4235..4528)
DNA (294bp) protein (98aa)
Transcriptional regulator, XRE family n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJZ5_ACIAC
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABM31283.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids2_trim150_scaffold_991_6
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4847..5197
DNA (351bp) protein (117aa)
Putative lipoprotein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G9V3_STEMA
Lipoprotein {ECO:0000313|EMBL:KGE06268.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_991_7
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5525..6280
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Burkholderia multivorans RepID=B9BUG6_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EEE05463.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_991_8
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6406..6687
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4WNX2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EEE05462.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
transcriptional regulator (DNA binding protein)
scnpilot_solids2_trim150_scaffold_991_9
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6702..7568
DNA (867bp) protein (289aa)
Plasmid replication initiator protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DY66_STEMA rbh
Replication protein A {ECO:0000313|EMBL:EEE05461.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
Plasmid replication initiator protein
scnpilot_solids2_trim150_scaffold_991_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7792..8430
DNA (639bp) protein (213aa)
Plasmid partitioning protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EF75_PSEAI rbh
ATPase {ECO:0000313|EMBL:KGE69537.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
scnpilot_solids2_trim150_scaffold_991_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..8690
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EF08_PSEAI
ParB partition protein {ECO:0000313|EMBL:KGE69536.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_991_12
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8687..9220
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Burkholderia multivorans RepID=B9BUG1_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EEE05458.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_991_13
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9217..9804
DNA (588bp) protein (196aa)
peptidase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036AEE22 rbh
Peptidase {ECO:0000313|EMBL:KGE06261.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
traF; plasmid conjugal transfer transmembrane protein
scnpilot_solids2_trim150_scaffold_991_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10241..12199
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YYP9_PSEAI rbh
Type VI secretion protein {ECO:0000313|EMBL:KGE69533.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
type IV secretory pathway VirD2 component rbh
scnpilot_solids2_trim150_scaffold_991_15
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12201..15245)
DNA (3045bp) protein (1015aa)
type III restriction enzyme (EC:3.1.21.5); K01156 type III restriction enzyme [EC:3.1.21.5] rbh
Type III restriction protein res subunit n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FA50_9BURK rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:EDT05616.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
scnpilot_solids2_trim150_scaffold_991_16
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15258..17201)
DNA (1944bp) protein (648aa)
type III restriction-modification system methylation subunit (EC:2.1.1.72); K07316 adenine-specific DNA-methyltransferase [EC:2.1.1.72] rbh
hypothetical protein n=1 Tax=Mycobacterium abscessus RepID=UPI00037E6E18 rbh
DNA methyltransferase {ECO:0000313|EMBL:AHI31652.1}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter salarius.;"
scnpilot_solids2_trim150_scaffold_991_17
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17403..19340)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5D4_AROAE rbh
ATPase {ECO:0000313|EMBL:KGP03314.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_991_18
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19337..20728)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5D5_AROAE rbh
Fibronectin-binding protein (FBP) {ECO:0000313|EMBL:KGP03710.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_991_19
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20750..21439)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000368D8CC rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KGP03313.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_991_20
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21436..24717)
DNA (3282bp) protein (1094aa)
Helicase domain protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FA53_9BURK rbh
Helicase domain protein {ECO:0000313|EMBL:EDT05619.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
helicase rbh
scnpilot_solids2_trim150_scaffold_991_21
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24755..24955)
DNA (201bp) protein (67aa)
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003774AF7
Excisionase {ECO:0000313|EMBL:KGP03311.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
excision promoter, Xis
scnpilot_solids2_trim150_scaffold_991_22
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25113..26057
DNA (945bp) protein (315aa)
Transcriptional regulator, LysR family n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UB72_RALSL rbh
Transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGH83638.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
scnpilot_solids2_trim150_scaffold_991_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26054..26335
DNA (282bp) protein (94aa)
Putative lipoprotein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5AAE7_RALSL
Uncharacterized protein {ECO:0000313|EMBL:KGE69527.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_991_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26507..28501
DNA (1995bp) protein (665aa)
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YUQ6_PSEAI rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGE69525.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 rbh
scnpilot_solids2_trim150_scaffold_991_25
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28498..28962
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EGU1_PSEAI
CopG family transcripitonal regulator {ECO:0000313|EMBL:AHC89230.1}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas monteilii SB3101.;"
CopG family transcriptional regulator
scnpilot_solids2_trim150_scaffold_991_26
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28959..29987
DNA (1029bp) protein (343aa)
P-type conjugative transfer ATPase TrbB n=2 Tax=Burkholderia multivorans RepID=B9BUE4_9BURK rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EEE05441.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
P-type conjugative transfer ATPase TrbB rbh
scnpilot_solids2_trim150_scaffold_991_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29984..30367
DNA (384bp) protein (128aa)
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YYQ9_PSEAI
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KGE69522.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
trbC; Conjugative transfer protein TrbC; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_991_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30364..30633
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8EG58_PSEAI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KGE69521.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
Conjugal transfer trbD transmembrane protein
scnpilot_solids2_trim150_scaffold_991_29
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30649..33099
DNA (2451bp) protein (817aa)
Conjugal transfer protein TrbE n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UXD4_PSEAI rbh
CagE, TrbE, VirB , component of type IV transporter system family protein {ECO:0000313|EMBL:KGC11472.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
ATPase rbh
scnpilot_solids2_trim150_scaffold_991_30
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33096..33824
DNA (729bp) protein (243aa)
Conjugative transfer protein TrbJ n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G9S9_STEMA rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:KGC11636.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
P-type conjugative transfer protein TrbJ rbh
Displaying items 1-30 of 52 in total

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