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scnpilot_solids2_trim150_scaffold_991_33

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_13

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 35491..36195

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=3 Tax=Pseudomonas aeruginosa RepID=U8EG63_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 456
  • Evalue 2.00e-125
  • rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KGE69516.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 456
  • Evalue 2.80e-125
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 234.0
  • Bit_score: 446
  • Evalue 4.90e-123
  • rbh

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCGATTCAAGCGACCGCAGGTGCGCTACGCCGATACGCCGCAGCCTGCCACCCCATACCAAGCCGCCGCGCAAGCGTGGGACGAGCGCATCGGCTCGGCCCGCGTGCAGGCGAAGAACTGGCGGTTGATGGCCTTCGGCTGCCTCGTGCTCGCGCTGCTGATGGCCGGTGGCCTGGTGTGGCGTTCGGCACAGTCCATCGTCACGCCCTACGTCGTGGAGGTGGACAACACCGGCCAAGTGCGTGCGGTCGGCGAAGCTGCCACGCCGTACCGGCCGGCCGATGCGCAGATCGCCTACCACCTCGCGCATTTCATCACGCTGGTTCGCTCGCTCTCCATCGACCCCATCGTGGTCCGGCAGGACTGGCTTGATGCCTACGACTACACCACCGACAAGGGCGCCGTCGTGCTCAACGACTACGCCAGCAAGAACGATCCGTTCGCGCGCGTCGGCAAGGAGTCGGTGACGGTGCAGATCACCAGCGTCGTTCGCGCCAGCGATTCGTCATTCAACGTGCGCTGGACGGAGCAACGGTTCGTCAATGGCGCACCGGCTGGCATCGAACGCTGGAATGCCGTGGTGTCCATCGTCCTGCAAACCCCGCGCACCGAGCAACGCCTGCGCAAGAACCCGCTCGGCATCTACGTCAACGGCCTGTCGTGGAGCCGCGAACTCGATGCGTCCGAAGGAGCCAAGCCATGA
PROTEIN sequence
Length: 235
MRFKRPQVRYADTPQPATPYQAAAQAWDERIGSARVQAKNWRLMAFGCLVLALLMAGGLVWRSAQSIVTPYVVEVDNTGQVRAVGEAATPYRPADAQIAYHLAHFITLVRSLSIDPIVVRQDWLDAYDYTTDKGAVVLNDYASKNDPFARVGKESVTVQITSVVRASDSSFNVRWTEQRFVNGAPAGIERWNAVVSIVLQTPRTEQRLRKNPLGIYVNGLSWSRELDASEGAKP*