ggKbase home page

scnpilot_solids2_trim150_scaffold_1768_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1768_curated_1
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..750)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. Rue61a RepID=J7LQW1_9MICC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR27251.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
scnpilot_solids2_trim150_scaffold_1768_curated_2
Streptomyces sp. NH, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(821..2236)
DNA (1416bp) protein (472aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1214491 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NH.;"
beta-glucosidase A (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21]
Beta-glucosidase n=1 Tax=Streptomyces sp. NH PF4_9ACTO">RepID=I7CPF4_9ACTO
scnpilot_solids2_trim150_scaffold_1768_curated_3
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2312..4795)
DNA (2484bp) protein (828aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RMA4_MYCRN
trehalose/maltose hydrolase or phosphorylase
Trehalose/maltose hydrolase or phosphorylase {ECO:0000313|EMBL:AEV71202.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
scnpilot_solids2_trim150_scaffold_1768_curated_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4792..5535)
DNA (744bp) protein (248aa)
Beta-phosphoglucomutase family hydrolase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6U4_THEBD
beta-phosphoglucomutase family hydrolase
Beta-phosphoglucomutase family hydrolase {ECO:0000313|EMBL:ADG89585.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
scnpilot_solids2_trim150_scaffold_1768_curated_5
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5732..6664
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K2M2_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY93524.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
scnpilot_solids2_trim150_scaffold_1768_curated_6
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6847..7509
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RG38_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ63551.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
scnpilot_solids2_trim150_scaffold_1768_curated_7
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7596..8705
DNA (1110bp) protein (370aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1Z2I5_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI41905.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
scnpilot_solids2_trim150_scaffold_1768_curated_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8718..9782)
DNA (1065bp) protein (355aa)
DNA polymerase LigD, polymerase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA polymerase LigD, polymerase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H892_CELFA
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:AEE44649.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
scnpilot_solids2_trim150_scaffold_1768_curated_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10264..10974
DNA (711bp) protein (237aa)
Putative TetR family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XHX0_MICPN
putative TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAK33265.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids2_trim150_scaffold_1768_curated_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11142..12803
DNA (1662bp) protein (554aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEA22583.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEA22583.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Xenobiotic-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQI5_PSEUX
xenobiotic-transporting ATPase; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_solids2_trim150_scaffold_1768_curated_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12852..14933
DNA (2082bp) protein (694aa)
Carbohydrate ABC transporter n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5S4_STRRD
carbohydrate ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
Carbohydrate ABC transporter {ECO:0000313|EMBL:ACZ91378.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_1768_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15160..16503
DNA (1344bp) protein (448aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9E8_NAKMY
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACV77216.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1768_curated_13
unknown

Not on your lists

16637..17110
DNA (474bp) protein (158aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1768_curated_14
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17271..18401)
DNA (1131bp) protein (377aa)
Enoyl-CoA hydratase/isomerase family protein n=2 Tax=Streptomyces RepID=D6ALA1_STRFL
2-ketocyclohexanecarboxyl-CoA hydrolase {ECO:0000313|EMBL:EWS96242.1}; TaxID=457430 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NRRL 11379.;"
enoyl-CoA hydratase/isomerase
scnpilot_solids2_trim150_scaffold_1768_curated_15
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18424..19440)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZE2_9BACT
hypothetical protein
Hypothethical protein {ECO:0000313|EMBL:CBJ40568.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
scnpilot_solids2_trim150_scaffold_1768_curated_16
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19456..23307)
DNA (3852bp) protein (1284aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NDD4_RALSL
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBJ40567.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
scnpilot_solids2_trim150_scaffold_1768_curated_17
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23593..23928
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000361BB32
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AFM16469.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
scnpilot_solids2_trim150_scaffold_1768_curated_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24112..25722
DNA (1611bp) protein (537aa)
NLP/P60 protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA07_NAKMY
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACV81207.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 18 items

View Taxonomy