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scnpilot_solids2_trim150_scaffold_95_curated

Search features with annotation key words

Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_95_curated_1
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1016)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI000370EC88
two-component system sensor kinase
scnpilot_solids2_trim150_scaffold_95_curated_2
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1013..1702)
DNA (690bp) protein (230aa)
transcriptional regulator n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00037BC164
Transcriptional regulator {ECO:0000313|EMBL:GAM46262.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_95_curated_3
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1783..3102
DNA (1320bp) protein (440aa)
Cytochrome b6-f complex iron-sulfur subunit 1 {ECO:0000313|EMBL:KJF17757.1}; EC=1.10.9.1 {ECO:0000313|EMBL:KJF17757.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IFK1_9PSEU
Rieske (2Fe-2S) domain-containing protein
scnpilot_solids2_trim150_scaffold_95_curated_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3099..3920
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFQ5_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78016.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_95_curated_5
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3917..4591
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000371E23C
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEB47021.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
scnpilot_solids2_trim150_scaffold_95_curated_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4908..5555
DNA (648bp) protein (216aa)
Transmembrane protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFC8_GEOOG
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:ADB76782.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_95_curated_7
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5898..6650)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00035FCE28
Putative uncharacterized protein {ECO:0000313|EMBL:EHK83827.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_95_curated_8
unknown

Not on your lists

comp(6803..7084)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_95_curated_9
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7159..8160)
DNA (1002bp) protein (334aa)
nitroreductase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B09A
Nitroreductase {ECO:0000313|EMBL:EQD87446.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_95_curated_10
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8241..9248)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00037CDF43
Uncharacterized protein {ECO:0000313|EMBL:EME55062.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_95_curated_11
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9542..11212
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000373B946
HAD hydrolase, family IIB {ECO:0000313|EMBL:EFG74199.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
HAD family hydrolase
scnpilot_solids2_trim150_scaffold_95_curated_12
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11292..12329)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000369FAC7
Alcohol dehydrogenase {ECO:0000313|EMBL:KDN22048.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
Zinc-containing dehydrogenase
scnpilot_solids2_trim150_scaffold_95_curated_13
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12567..13493
DNA (927bp) protein (309aa)
universal stress protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026280FD
Universal stress protein {ECO:0000313|EMBL:AIJ23136.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
Universal stress protein family
scnpilot_solids2_trim150_scaffold_95_curated_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13528..13986)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJV8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26983.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_95_curated_15
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14242..14796
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037EC300
Uncharacterized protein {ECO:0000313|EMBL:KFD42775.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
flavodoxin/nitric oxide synthase
scnpilot_solids2_trim150_scaffold_95_curated_16
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14796..15851
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003697AC8
Uncharacterized protein {ECO:0000313|EMBL:KJR08975.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_95_curated_17
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15942..16394)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1Y8Y6_9MICC
xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:ADX73237.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_solids2_trim150_scaffold_95_curated_18
unknown

Not on your lists

comp(16846..16986)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_95_curated_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17059..17526)
DNA (468bp) protein (156aa)
stress protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7A4EA
Universal stress protein UspA {ECO:0000313|EMBL:EWT00288.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
UspA domain-containing protein
scnpilot_solids2_trim150_scaffold_95_curated_20
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17523..17927)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M361_ARTPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX73282.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_solids2_trim150_scaffold_95_curated_21
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18107..19111)
DNA (1005bp) protein (335aa)
alcohol dehydrogenase (EC:1.1.1.-); K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Alcohol dehydrogenase {ECO:0000313|EMBL:BAK35305.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAK35305.1};; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Alcohol dehydrogenase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XET9_MICPN
scnpilot_solids2_trim150_scaffold_95_curated_22
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19168..20067)
DNA (900bp) protein (300aa)
Universal stress protein family n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K886_SACES
Universal stress protein family
Universal stress protein family {ECO:0000313|EMBL:CCH32888.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_solids2_trim150_scaffold_95_curated_23
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20200..22128
DNA (1929bp) protein (643aa)
heavy metal translocating P-type ATPase; K01552 [EC:3.6.3.-]
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LCH1_9MICO
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHL05677.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_solids2_trim150_scaffold_95_curated_24
unknown

Not on your lists

22222..22581
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_95_curated_25
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22613..23377
DNA (765bp) protein (255aa)
Polysaccharide deacetylase n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M2ZUM9_STRMB
Polysaccharide deacetylase {ECO:0000313|EMBL:EME96418.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
polysaccharide deacetylase
scnpilot_solids2_trim150_scaffold_95_curated_26
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23415..23675
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026255E4
Uncharacterized protein {ECO:0000313|EMBL:EID10529.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_95_curated_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23719..24810)
DNA (1092bp) protein (364aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acetate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJV9_PSEUX
scnpilot_solids2_trim150_scaffold_95_curated_28
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24813..27155)
DNA (2343bp) protein (781aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
Probable phosphoketolase n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RCH9_MYCPH
putative phosphoketolase
scnpilot_solids2_trim150_scaffold_95_curated_29
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27335..29980
DNA (2646bp) protein (882aa)
Mg(2+) transport ATPase, P-type; K01531 Mg2+-importing ATPase [EC:3.6.3.2]
Magnesium-translocating P-type ATPase n=1 Tax=Streptomyces sp. Mg1 RepID=B4UYI9_9ACTO
Mg2+-importing ATPase {ECO:0000313|EMBL:EWM12143.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
scnpilot_solids2_trim150_scaffold_95_curated_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30631..33312
DNA (2682bp) protein (894aa)
GCN5-related N-acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6G7_NAKMY
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV78822.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 202 in total

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