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scnpilot_solids2_trim150_scaffold_224_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_224_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..872)
DNA (870bp) protein (290aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
ATP-dependent helicase HrpA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X757_NAKMY
ATP-dependent helicase HrpA {ECO:0000313|EMBL:ACV76926.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_224_curated_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1143..2507
DNA (1365bp) protein (455aa)
gdhA; NADP-specific glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
glutamate dehydrogenase n=1 Tax=Actinomadura atramentaria RepID=UPI00037481B0
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids2_trim150_scaffold_224_curated_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2618..3859
DNA (1242bp) protein (414aa)
PfkB domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQN2_NOCSJ
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABL84117.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_224_curated_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3905..4834
DNA (930bp) protein (310aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000255|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000255|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000255|HAMAP-Rule:MF_01876};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=PSUG_NOCSJ
indigoidine synthase A family protein
scnpilot_solids2_trim150_scaffold_224_curated_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4874..5593)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY15641.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
scnpilot_solids2_trim150_scaffold_224_curated_6
unknown

Not on your lists

5627..6463
DNA (837bp) protein (279aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_224_curated_7
unknown

Not on your lists

comp(6516..6740)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_224_curated_8
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6868..7419)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000381CEF8
Acetyltransferase {ECO:0000313|EMBL:EWT02425.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_224_curated_9
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7553..8134)
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNG5_KRIFD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB30817.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids2_trim150_scaffold_224_curated_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8124..8561)
DNA (438bp) protein (146aa)
Polyketide cyclase/dehydrase n=1 Tax=Frankia sp. CN3 RepID=G6HHJ3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU77219.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
scnpilot_solids2_trim150_scaffold_224_curated_11
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8632..9267
DNA (636bp) protein (212aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9URH2_9ACTO
scnpilot_solids2_trim150_scaffold_224_curated_12
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9527..10747)
DNA (1221bp) protein (407aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01761 methionine-gamma-lyase [EC:4.4.1.11]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000370F3B5
Cystathionine gamma-synthase {ECO:0000313|EMBL:EYR63959.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
scnpilot_solids2_trim150_scaffold_224_curated_13
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10854..11336
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XT05_9ACTO
AsnC family transcriptional regulator {ECO:0000313|EMBL:EYR63960.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
AsnC/Lrp family regulatory protein
scnpilot_solids2_trim150_scaffold_224_curated_14
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11508..13010
DNA (1503bp) protein (501aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Mercuric reductase/transcriptional regulator, fusion n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6G2_9ACTO
Mercuric reductase/transcriptional regulator, fusion {ECO:0000313|EMBL:EFL22493.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
scnpilot_solids2_trim150_scaffold_224_curated_15
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13080..14486)
DNA (1407bp) protein (469aa)
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter n=1 Tax=Streptomyces sp. HGB0020 RepID=S2ZDX8_9ACTO
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:EPD68172.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
efflux membrane protein
scnpilot_solids2_trim150_scaffold_224_curated_16
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14552..15340
DNA (789bp) protein (263aa)
Regulatory protein ArsR n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P8R6_STRVO
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEM86631.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
scnpilot_solids2_trim150_scaffold_224_curated_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15350..15895)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00035EC640
Adenylate kinase {ECO:0000313|EMBL:AKF11754.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
putative adenylate kinase
scnpilot_solids2_trim150_scaffold_224_curated_18
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16128..22391
DNA (6264bp) protein (2088aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4L1_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN03677.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
scnpilot_solids2_trim150_scaffold_224_curated_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22603..24255
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000370A6BE
Uncharacterized protein {ECO:0000313|EMBL:KHK99469.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_224_curated_20
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24322..25032
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M920_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KGN40795.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_224_curated_21
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25062..25529)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000378CF77
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL14042.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_solids2_trim150_scaffold_224_curated_22
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25714..26655
DNA (942bp) protein (314aa)
RNA polymerase sigma 70 n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0002E9685D
sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EJJ01103.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
scnpilot_solids2_trim150_scaffold_224_curated_23
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

26633..27106
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3V5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81193.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_224_curated_24
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27262..27975
DNA (714bp) protein (238aa)
aminotransferase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B56AA5
Amino transferase {ECO:0000313|EMBL:EHN78117.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
glutamine amidotransferase
scnpilot_solids2_trim150_scaffold_224_curated_25
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28326..29111
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037E64F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53839.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_224_curated_26
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29116..29670
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00035C5B23
Vitamin K epoxide reductase {ECO:0000313|EMBL:EWS99855.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
vitamin K epoxide reductase
scnpilot_solids2_trim150_scaffold_224_curated_27
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29691..32330)
DNA (2640bp) protein (880aa)
excinuclease ABC subunit A n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B35524
Excinuclease ATPase subunit; K03701 excinuclease ABC subunit A
Excinuclease ATPase subunit {ECO:0000313|EMBL:ACV05571.1}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
scnpilot_solids2_trim150_scaffold_224_curated_28
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32374..33444)
DNA (1071bp) protein (357aa)
membrane dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003623EC9
Renal dipeptidase {ECO:0000313|EMBL:EWM64776.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
scnpilot_solids2_trim150_scaffold_224_curated_29
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33522..34325)
DNA (804bp) protein (268aa)
creatinine amidohydrolase; K01470 creatinine amidohydrolase [EC:3.5.2.10]
Creatinine amidohydrolase n=2 Tax=Saccharomonospora azurea RepID=H0K1C9_9PSEU
Tax=RBG_13_Deltaproteobacteria_53_10_curated
scnpilot_solids2_trim150_scaffold_224_curated_30
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34412..36091)
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034501FD
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EYT63529.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Displaying items 1-30 of 50 in total

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