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scnpilot_solids2_trim150_scaffold_1517_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1517_curated_1
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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221..712
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QY85_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB17786.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
scnpilot_solids2_trim150_scaffold_1517_curated_2
unknown

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comp(812..1015)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1517_curated_3
unknown

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comp(1008..1850)
DNA (843bp) protein (281aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1517_curated_4
unknown

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1923..2810
DNA (888bp) protein (296aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1517_curated_5
Corynebacterium durum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3009..3344
DNA (336bp) protein (112aa)
WXG100 family type VII secretion target n=1 Tax=Corynebacterium durum F0235 RepID=L1MIW1_9CORY
WXG100 family type VII secretion target {ECO:0000313|EMBL:EKX91228.1}; TaxID=1035195 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium durum F0235.;"
scnpilot_solids2_trim150_scaffold_1517_curated_6
unknown

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3400..3702
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1517_curated_7
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3656..4264)
DNA (609bp) protein (203aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BS16_STRBB
Contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02659.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1517_curated_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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4573..5523
DNA (951bp) protein (317aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8]
Proline dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV1_NAKMY
Proline dehydrogenase {ECO:0000313|EMBL:ACV76634.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1517_curated_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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5574..7208
DNA (1635bp) protein (545aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12]
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV2_NAKMY
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACV76635.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1517_curated_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(7221..8501)
DNA (1281bp) protein (427aa)
MFS transporter n=1 Tax=Serinicoccus marinus RepID=UPI0003B2FFAA
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB76445.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_1517_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(8513..9496)
DNA (984bp) protein (328aa)
Aldo/keto reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8V5_NAKMY
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV81053.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1517_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9517..10890)
DNA (1374bp) protein (458aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ACV76640.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ACV76640.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV7_NAKMY
scnpilot_solids2_trim150_scaffold_1517_curated_13
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11040..11681
DNA (642bp) protein (214aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
methionine sulfoxide reductase A n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B42E87
scnpilot_solids2_trim150_scaffold_1517_curated_14
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11733..12719)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QI28_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB12479.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1517_curated_15
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12954..13475
DNA (522bp) protein (174aa)
Alpha-crystallin n=15 Tax=Mycobacterium abscessus RepID=I6ZHB1_MYCAB
Um strain SMUC14 PROKKA_contig000003, whole genome shotgun sequence {ECO:0000313|EMBL:KIU41871.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium immunogenum.;"
heat shock protein Hsp20
scnpilot_solids2_trim150_scaffold_1517_curated_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13541..14971)
DNA (1431bp) protein (477aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJ24_NAKMY
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ACV76611.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1517_curated_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14997..15197)
DNA (201bp) protein (67aa)
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV8_NAKMY
Displaying 17 items

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