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scnpilot_solids2_trim150_scaffold_142_curated

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_142_curated_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1622
DNA (1620bp) protein (540aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z159_9RHIZ
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIM29951.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_142_curated_2
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1665..2612
DNA (948bp) protein (316aa)
ABC transporter inner membrane protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LL44_9RHIZ
ABC transporter inner membrane protein {ECO:0000313|EMBL:EKF18504.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_142_curated_3
bacterium YEK0313, Bacteria

Not on your lists

2605..3489
DNA (885bp) protein (295aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N2P6_9RHIZ
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:CEJ10533.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_142_curated_4
bacterium YEK0313, Bacteria

Not on your lists

3486..4322
DNA (837bp) protein (279aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MMM6_9RHIZ
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CEJ10534.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_142_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4319..5332
DNA (1014bp) protein (338aa)
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) {ECO:0000313|EMBL:KFC71661.1}; EC=3.6.3.27 {ECO:0000313|EMBL:KFC71661.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Peptide ABC transporter ATPase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8M0_9RHIZ
oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_142_curated_6
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5451..6167
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S720_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:KJK11479.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein; K07090
scnpilot_solids2_trim150_scaffold_142_curated_7
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6349..8115
DNA (1767bp) protein (589aa)
Dihydroxy-acid dehydratase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K8_9CHLR
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AJY75905.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
dihydroxyacid dehydratase/phosphogluconate dehydratase
scnpilot_solids2_trim150_scaffold_142_curated_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8199..9521
DNA (1323bp) protein (441aa)
putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000377A9B7
Putative aminotransferase {ECO:0000313|EMBL:BAL87948.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
scnpilot_solids2_trim150_scaffold_142_curated_9

Not on your lists

9518..11053
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626627
Uncharacterized protein {ECO:0000313|EMBL:KKN36795.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_142_curated_10
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11183..11464
DNA (282bp) protein (94aa)
Endoribonuclease L-PSP n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYZ1_9PLAN
Endoribonuclease L-PSP {ECO:0000313|EMBL:EAQ78356.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
endoribonuclease L-PSP
scnpilot_solids2_trim150_scaffold_142_curated_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11709..13334
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036FE137
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB12143.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_142_curated_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13467..14414
DNA (948bp) protein (316aa)
peptide ABC transporter n=1 Tax=Kaistia granuli RepID=UPI00036D7D34
ABC transporter permease {ECO:0000313|EMBL:KFL32734.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC dipeptide/oligopeptide transporter permease
scnpilot_solids2_trim150_scaffold_142_curated_13
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14411..15313
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037DAEF7
ABC transporter permease {ECO:0000313|EMBL:KKC38830.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
dipeptide/oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_142_curated_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15313..16317
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368939C
ABC transporter {ECO:0000313|EMBL:KKB12146.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
oligopeptide/dipeptide ABC transporter ATPase subunit; K02031 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_142_curated_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16314..17177
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036809EE
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB12205.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter-like protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_142_curated_16
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18512..18892
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYZ1_9PLAN
Endoribonuclease L-PSP {ECO:0000313|EMBL:EAQ78356.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
endoribonuclease L-PSP
scnpilot_solids2_trim150_scaffold_142_curated_17
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19112..20593
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F526C
Microcystin LR degradation protein MlrC-like protein {ECO:0000313|EMBL:EKF18512.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
microcystin LR degradation protein MlrC-like protein
scnpilot_solids2_trim150_scaffold_142_curated_18
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20602..21828)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIJ3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75802.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_142_curated_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22363..23451
DNA (1089bp) protein (363aa)
Mandelate racemase/muconate lactonizing enzyme n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFX2_9ACTN
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:EAR25878.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
mandelate racemase/muconate lactonizing protein
scnpilot_solids2_trim150_scaffold_142_curated_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23468..24574
DNA (1107bp) protein (369aa)
Putative LacI-family transcriptional regulator, ribose operon repressor n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFX1_9ACTN
Putative LacI-family transcriptional regulator, ribose operon repressor {ECO:0000313|EMBL:EAR25877.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_142_curated_21
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24681..25508
DNA (828bp) protein (276aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGD8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75803.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_142_curated_22
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25453..26628
DNA (1176bp) protein (392aa)
Mandelate racemase {ECO:0000313|EMBL:KJL32085.1}; EC=5.1.2.2 {ECO:0000313|EMBL:KJL32085.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031187C1
mandelate racemase/muconate lactonizing protein
scnpilot_solids2_trim150_scaffold_142_curated_23
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26870..28045
DNA (1176bp) protein (392aa)
sugar ABC transporter, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF009
Cyclodextrin-binding protein {ECO:0000313|EMBL:KJL30459.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ABC transporter substrate-binding protein (sugar); K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_142_curated_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28168..29085
DNA (918bp) protein (306aa)
ABC transporter, membrane spanning protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF16B
Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:KJL30458.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ABC transporter membrane spanning protein; K02025 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_142_curated_25
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29082..29921
DNA (840bp) protein (280aa)
sugar ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF16A
Putative ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AIY02966.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
ABC transporter membrane spanning protein; K02026 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_142_curated_26
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29926..31083
DNA (1158bp) protein (386aa)
sugar ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF169
Glycerol-3-phosphate transporter ATP-binding subunit {ECO:0000313|EMBL:CDN52160.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
ABC transporter-like protein
scnpilot_solids2_trim150_scaffold_142_curated_27
RLO_PLX_64_10, Bacteria

Not on your lists

comp(31115..31873)
DNA (759bp) protein (253aa)
short-chain dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029AF7EC
short-chain alcohol dehydrogenase-like protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_solids2_trim150_scaffold_142_curated_28
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(31926..33245)
DNA (1320bp) protein (440aa)
amidohydrolase n=1 Tax=Schlesneria paludicola RepID=UPI000299EC0D
Uncharacterized protein {ECO:0000313|EMBL:AKH16527.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
amidohydrolase
scnpilot_solids2_trim150_scaffold_142_curated_29
uncultured actinobacterium HF0500_35G12, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33273..34037)
DNA (765bp) protein (255aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=uncultured actinobacterium HF0500_35G12 RepID=E7C660_9ACTN
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:ADI22934.1}; TaxID=723604 species="Bacteria; Actinobacteria; marine Actinobacteria clade; environmental samples.;" source="uncultured actinobacterium HF0500_35G12.;"
short chain dehydrogenase/reductase family oxidoreductase
scnpilot_solids2_trim150_scaffold_142_curated_30
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34030..34269)
DNA (240bp) protein (80aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoamide acyltransferase {ECO:0000313|EMBL:BAK37237.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAK37237.1};; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Dihydrolipoamide acyltransferase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XS24_MICPN
Displaying items 1-30 of 85 in total

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