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scnpilot_solids2_trim150_scaffold_360_curated_3

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(645..869)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AbrB family n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BIA3_CHLPD similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 74.0
  • Bit_score: 76
  • Evalue 1.80e-11
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 74.0
  • Bit_score: 76
  • Evalue 5.60e-12
Regulator of stationary/sporulation SpoVT/AbrB {ECO:0000313|EMBL:GAJ29305.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 75.0
  • Bit_score: 76
  • Evalue 2.50e-11

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Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGCGCATCACCTCCAAGGGACAGGTCACCATTCCCCTGCACATCCGGCAGCGACACGGACTCCTGCCCGACTGCGAGGTCGACTTCGTCGAGGACGGCGACGAGGTGAAGATCGTCGCGAGGGCAACGGACGANNNNNNNNNNNNNNNNNNNGTCCGCGCGCTGCGGGGGCGCGCCGACTCCGGCCTGAGCACGGAGGAGATCATGGCGCTGACCCGTGACTGA
PROTEIN sequence
Length: 75
MRITSKGQVTIPLHIRQRHGLLPDCEVDFVEDGDEVKIVARATDXXXXXXXVRALRGRADSGLSTEEIMALTRD*