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scnpilot_solids2_trim150_scaffold_360_curated_11

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 7620..8003

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 127.0
  • Bit_score: 170
  • Evalue 1.30e-39
Ribonuclease VapC n=3 Tax=Mycobacterium canettii RepID=G0TG71_MYCCP similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 127.0
  • Bit_score: 170
  • Evalue 9.10e-40
Conserved protein of unknown function with PIN domain similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 127.0
  • Bit_score: 170
  • Evalue 2.90e-40

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Taxonomy

Mycobacterium canettii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGATCGTCGTGGATGCCTCAGCGGCGGTGTCGGGCCTGCTCAACGATGGGCAAGCCCGCCGCGCACTGGGTGCCGAGCAAATTCACATGCCCCATCTCATCGATTCGGAGGTTGCCAGCGCGCTGCGGCGGCGAGTTCTTGCGGGCCAGGTCAGCGAACGTGACGGATGGGCTGCCCTGGATGTCTGGCGTCGACTGGCCGCCATCCGGTACCCGGCGCATGGCCTTCTCGAGCGCGTATGGCAGTTGCGGACGAACCTCTCCGCGTACGACGCCGGCTATGTCGCTCTTGCCGAGGCGCTGGATTGCTCGCTACTTACGGCGGACGCCCGCCTGAGCCGCGCCCCCGGCATCCGCTGCGCAGTCACCGTGGTGCCCCGGTAG
PROTEIN sequence
Length: 128
MIVVDASAAVSGLLNDGQARRALGAEQIHMPHLIDSEVASALRRRVLAGQVSERDGWAALDVWRRLAAIRYPAHGLLERVWQLRTNLSAYDAGYVALAEALDCSLLTADARLSRAPGIRCAVTVVPR*