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scnpilot_solids2_trim150_scaffold_2195_curated_9

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(6467..7165)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTF6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 209.0
  • Bit_score: 330
  • Evalue 1.60e-87
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 209.0
  • Bit_score: 330
  • Evalue 5.10e-88
Regulatory protein TetR {ECO:0000313|EMBL:AEA27381.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 209.0
  • Bit_score: 330
  • Evalue 2.30e-87

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCCGGCCACTACCGACGCCCGGGAGCCCCGCACATTCACCGACAAGGGGCAGGCGACGCGCGCCCGCATCCTGAAGCACGCCGCGGAACTGATCTATGCCGGCGGGGTGCACGCCACCAACAACGACAAGCTCCGGCGCGCCGCAGGCGTCAGTGGGTCGCAGATCAATCACTACTTCCCGACCAAGGAAAGCCTCGTGCTGGCGGTCATCGCGTGGCAGGCCGAGCGCGTGCTTGCCTTTCACCGCAGCGAACGCTTCGCGGGGTTCGACACCTTGGATGCGCTGCGCGACTGGGCGAACCACTACATCGCCTACGAGCGTGCCTACCAGGAGGGCTGTACCCTCGGCTCGTTGGCCAGCGAGATCATCAAGACCGACCTCGACGTGCACCAGGAACTGGCCGGCGCCTTCGACCGGTGGCGGGACGTCTTTCGCGACGGGCTGACGCGGATGCAGCAACTCGGACGGCTGGTCGGCGCCGCGGACCCCAGGGCACTCGCCAACCTCCTGCTGTCCGCCTTCCAGGGTGGCATGCTGCTCGCCCAGGTCGCCCGGGACATCACCCCGTTGAAAGACGCGCTGCACGCCGCCATCGACCACGTGCAGGCATTCACAACACCGCCGGACCGGCGGGCCATGGAGTCATCCGCAGCGTCCGGCCAGCGCGCCATCGACGCCGCGACCGACGGGTCGTGA
PROTEIN sequence
Length: 233
MPATTDAREPRTFTDKGQATRARILKHAAELIYAGGVHATNNDKLRRAAGVSGSQINHYFPTKESLVLAVIAWQAERVLAFHRSERFAGFDTLDALRDWANHYIAYERAYQEGCTLGSLASEIIKTDLDVHQELAGAFDRWRDVFRDGLTRMQQLGRLVGAADPRALANLLLSAFQGGMLLAQVARDITPLKDALHAAIDHVQAFTTPPDRRAMESSAASGQRAIDAATDGS*