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scnpilot_solids2_trim150_scaffold_2195_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2195_curated_1
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(472..2013)
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCJ2_INTC7
AAA-like domain protein {ECO:0000313|EMBL:KJE75712.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2195_curated_2
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2080..2844)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000377B1A4
Uncharacterized protein {ECO:0000313|EMBL:KJE75711.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2195_curated_3
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2849..3358
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BXN1_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:CCI52330.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2195_curated_4
unknown

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comp(3335..3934)
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2195_curated_5
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3966..4559
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U291_RHOSH
hypothetical protein
Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence {ECO:0000313|EMBL:ABA80982.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
scnpilot_solids2_trim150_scaffold_2195_curated_6
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4559..5182
DNA (624bp) protein (208aa)
UPI0003D6BD51 related cluster n=1 Tax=unknown RepID=UPI0003D6BD51
RES domain protein {ECO:0000313|EMBL:ETT25549.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2195_curated_7
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5345..5893
DNA (549bp) protein (183aa)
lysine decarboxylase n=1 Tax=Streptomyces sp. SS RepID=UPI0003706124
Lysine decarboxylase {ECO:0000313|EMBL:AJF67409.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
hypothetical protein; K06966
scnpilot_solids2_trim150_scaffold_2195_curated_8
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5982..6455)
DNA (474bp) protein (158aa)
GCN5-related N-acetyltransferase n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JWG4_ARTS2
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABK03384.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids2_trim150_scaffold_2195_curated_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6467..7165)
DNA (699bp) protein (233aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTF6_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA27381.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_2195_curated_10
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7277..8194
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2XWP1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD54410.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
alcohol dehydrogenase GroES domain-containing protein
scnpilot_solids2_trim150_scaffold_2195_curated_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8362..10848
DNA (2487bp) protein (829aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B4AEEA
HTH-type transcriptional regulator malT {ECO:0000313|EMBL:AIY18996.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
LuxR family ATP-dependent transcriptional regulator
Displaying 11 items

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