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scnpilot_solids2_trim150_scaffold_1253_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1253_curated_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(153..1058)
DNA (906bp) protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5J6_VERMA
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65222.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
binding-protein-dependent transport system inner membrane protein; K11070 spermidine/putrescine transport system permease protein
scnpilot_solids2_trim150_scaffold_1253_curated_2
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1055..1912)
DNA (858bp) protein (286aa)
Polyamine ABC transporter permease n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HFN4_STRPR
Polyamine ABC transporter permease {ECO:0000313|EMBL:EDY65645.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
Putrescine transport system permease protein PotH
scnpilot_solids2_trim150_scaffold_1253_curated_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1963..3120)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036834C5
Polyamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYR64294.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_1253_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3125..4321)
DNA (1197bp) protein (399aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7I7_CONWI
spermidine/putrescine ABC transporter ATPase
scnpilot_solids2_trim150_scaffold_1253_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4525..5907
DNA (1383bp) protein (461aa)
Aminotransferase class-III n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET7_CONWI
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ADB49761.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1253_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5918..7474
DNA (1557bp) protein (519aa)
Transcriptional regulator, PucR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET8_CONWI
PucR family transcriptional regulator; K09684 purine catabolism regulatory protein
Transcriptional regulator, PucR family {ECO:0000313|EMBL:ADB49762.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1253_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7474..8595
DNA (1122bp) protein (374aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alanine dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET9_CONWI
scnpilot_solids2_trim150_scaffold_1253_curated_8
Vibrio sp. DCR 1-4-2, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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8608..10380
DNA (1773bp) protein (591aa)
hypothetical protein, partial n=1 Tax=Enterovibrio calviensis RepID=UPI000364DCAC
Type I secretion protein {ECO:0000313|EMBL:KII76642.1}; TaxID=1461322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. DCR 1-4-2.;"
putative calcium-binding protein
scnpilot_solids2_trim150_scaffold_1253_curated_9
unknown

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10647..11135
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B60B78
hypothetical protein
scnpilot_solids2_trim150_scaffold_1253_curated_10
unknown

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11132..11380
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1253_curated_11
unknown

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11385..11591
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1253_curated_12

Not on your lists

11579..11788
DNA (210bp) protein (70aa)
Marine sediment metagenome DNA, contig: S01H1_S40920 {ECO:0000313|EMBL:GAG48150.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_1253_curated_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11788..12177
DNA (390bp) protein (130aa)
Zn-dependent hydrolase n=1 Tax=Patulibacter medicamentivorans RepID=H0EA09_9ACTN
Zn-dependent hydrolase {ECO:0000313|EMBL:EHN09490.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
rhodanese
scnpilot_solids2_trim150_scaffold_1253_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12244..14082
DNA (1839bp) protein (613aa)
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K2_CONWI
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ADB53936.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1253_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14120..14839
DNA (720bp) protein (240aa)
phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]
Phosphoadenylyl-sulfate reductase (thioredoxin) {ECO:0000256|SAAS:SAAS00089161}; EC=1.8.4.8 {ECO:0000256|SAAS:SAAS00089161};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphoadenosine phosphosulfate reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K4_CONWI
scnpilot_solids2_trim150_scaffold_1253_curated_16
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14861..15790
DNA (930bp) protein (310aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 2 n=2 Tax=Micromonospora sp. ATCC 39149 RepID=C4REZ4_9ACTO
scnpilot_solids2_trim150_scaffold_1253_curated_17
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15819..17690
DNA (1872bp) protein (624aa)
cysN2; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (EC:2.7.1.25 2.7.7.4); K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
Putative sulfate adenylyltransferase subunit 1 n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YWZ0_NOCFA
Putative sulfate adenylyltransferase subunit 1 {ECO:0000313|EMBL:BAD57301.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying 17 items

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