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scnpilot_solids2_trim150_scaffold_2138_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2138_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(155..1117)
DNA (963bp) protein (321aa)
UPF0042 nucleotide-binding protein Cwoe_4535 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V3_CONWI
hypothetical protein; K06958 UPF0042 nucleotide-binding protein
Nucleotide-binding protein Cwoe_4535 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2138_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1083..2978)
DNA (1896bp) protein (632aa)
UvrABC system protein C n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V4_CONWI
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2138_curated_3
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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3002..3814
DNA (813bp) protein (271aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase/isomerase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FHQ9_DESAA
Tax=RBG_16_Zixibacteria_48_11_curated
scnpilot_solids2_trim150_scaffold_2138_curated_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3863..4543)
DNA (681bp) protein (227aa)
JerF n=1 Tax=Sorangium cellulosum RepID=A1YBT9_SORCE
JerF {ECO:0000313|EMBL:ABK32292.1}; TaxID=56 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (Polyangium cellulosum).;"
type 12 methyltransferase
scnpilot_solids2_trim150_scaffold_2138_curated_5
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4558..5031)
DNA (474bp) protein (158aa)
MaoC-like dehydratase n=2 Tax=Bacteria RepID=A0Z4N3_9GAMM
enoyl-CoA hydratase
Tax=CG_Desulfob_01
scnpilot_solids2_trim150_scaffold_2138_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5031..5417)
DNA (387bp) protein (129aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZK1_CONWI
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB53839.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2138_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5470..7077
DNA (1608bp) protein (536aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9C1_CONWI
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ADB49088.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2138_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7430..8869)
DNA (1440bp) protein (480aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V5_CONWI
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADB52950.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2138_curated_9
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8891..9343
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM21 RepID=J2PNW4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM25274.1}; Flags: Precursor;; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM21.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2138_curated_10
unknown

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comp(9333..10046)
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2138_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10043..10477)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V7_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52952.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2138_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(10470..10832)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E653_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10822.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
Displaying 12 items

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