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scnpilot_solids2_trim150_scaffold_1203_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1203_curated_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(38..595)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9B9_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91664.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_1203_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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697..1347
DNA (651bp) protein (217aa)
molybdenum cofactor biosynthesis protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
Molybdenum cofactor biosynthesis protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT6_CONWI
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:ADB51448.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1203_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1355..1747
DNA (393bp) protein (131aa)
MerR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B6A871
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADB51883.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1203_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1829..2941)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2L9_CONWI
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
Uncharacterized protein {ECO:0000313|EMBL:ADB52285.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1203_curated_5
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

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3101..3781
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003818635
Uncharacterized protein {ECO:0000313|EMBL:KGI82751.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
scnpilot_solids2_trim150_scaffold_1203_curated_6
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3711..4931)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000362379D
Histidine kinase {ECO:0000313|EMBL:AKH86055.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
histidine kinase
scnpilot_solids2_trim150_scaffold_1203_curated_7
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4934..5575)
DNA (642bp) protein (214aa)
Transcriptional regulator n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N0A8_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:KDS89045.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
two-component regulator CutR
scnpilot_solids2_trim150_scaffold_1203_curated_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5708..6211
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q038_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL16704.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
scnpilot_solids2_trim150_scaffold_1203_curated_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6213..7370
DNA (1158bp) protein (386aa)
Peptidoglycan-binding protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDZ9_9ACTO
Peptidoglycan-binding protein {ECO:0000313|EMBL:CCH22046.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
peptidoglycan-binding domain 1 protein
scnpilot_solids2_trim150_scaffold_1203_curated_10
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7367..8074
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces sp. SS RepID=UPI0002D5DCF0
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKD03978.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1203_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8071..9261
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037E33EB
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ADB48659.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1203_curated_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9258..10286
DNA (1029bp) protein (343aa)
putative D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
peptidase S11 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B64EEF
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:BAL85725.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
scnpilot_solids2_trim150_scaffold_1203_curated_13
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10234..11256)
DNA (1023bp) protein (341aa)
PREDICTED: pulmonary surfactant-associated protein D-like n=1 Tax=Capra hircus RepID=UPI0003AF69F7
Collagen triple helix repeat family protein {ECO:0000313|EMBL:AJI03915.1}; TaxID=269801 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus G9241.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1203_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11397..15299
DNA (3903bp) protein (1301aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYY6_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49860.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1203_curated_15
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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15437..18121
DNA (2685bp) protein (895aa)
Putative transcriptional regulator, LuxR family n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ELV7_AMYSD
putative LuxR family transcriptional regulator
Putative transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEF42738.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
Displaying 15 items

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