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scnpilot_solids2_trim150_scaffold_275_curated_30

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(32052..33272)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIW7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 396.0
  • Bit_score: 253
  • Evalue 2.60e-64
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 396.0
  • Bit_score: 253
  • Evalue 8.20e-65
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:AEA22946.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 396.0
  • Bit_score: 253
  • Evalue 3.60e-64

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGGACGTTCTGAAGTCAGTGCGTTGGTTGGTCGCCGCACTCGCCATCTTGGCGCTCGGCGTTGGCGTGGCAGCATGTGGGGGCTCGTCGAGCTCGAGCAGTTCCGGTACCACTTCGGAAGCCGCCGGATCGACGGGCGAAGAATCCTCCGAAACTTCCGAACCCTCTGAATCGTCCGCGTCCGATGGTGTGGCCGAGGCCGAAAAACTGGTCGCGGCGGCGCGTAAGCCGCAAGCGTTCGACCCACCCGGGAAACCGATCTCGGTGAGTGGGCTGAAGGGCAAGACGGTGTACGACATCACCAACCAGCTGGCGGTCGCGTTCGAGAAGACCCTGACCAGCAACACGACCGAAGCGCTGGCGAAAGCGGGCATCAAGAACGTGGTCGTGCAGGCCAACAACGAAGTCTCCCAGGCGACGAAGCTGATCGAACAGGCCGTCGCCCAGAACGCCGACGCGATCATCATCGAGTCGTTCAAGAGCGACCTGATCGCCGGGCCGCTGCAGGAAGCCAAGGCGGCGGGCATCCCGGTGATCGACCTGTTCGAAGGCGACCCGGCCCTGCCGACGCCCAAGCAGGTCGAACAAGGGGTCGCCGCGCTGGCCACCTTCTGTTACTCGTGCGCCGGGAAGCTGATGGCCGACTGGGTGATCGCCGACAGCGGCGGCGAAGGCGTCCACGGCGTCACCTACTACAGCGACGACCTGGGGTCGAGCCTGGCGGTGAACGAAGGCCAGAAGGACGAGTTCGCGCGGCTCTGCCCGGAATGCAAGGTCGAATACAAGAACGTCCAAGGGTCCCAGTGGACGACGAAAATCCCGACCCTCACCCAGTCCGACGTCGCGAATCCGGAAGTGAACTACTTCATTCCGAATTTCGACGGTATGGCGACCTTCATGGTGCCGGCGATCAACGCGGCGGGTGCCACGGAAAGGGTCAAGCTCGCGAGCTTCAACGCGAACCTGCCGTTCATGGAAGAAATGCAGAACGGCGGCGTGATCAAATCCGACGTCGGCAGCCCGGTCGCCTGGATGGGTTGGGCCGTCGCCGACCAGACCATGAGGGTCATGAACGGTGAAGAACCGCTCGAAGACGTCGGGATCCCACTGCGGATGTTCGACGAGTCGAACATCGGCGAAATCGACCTGAGCGAACCGGAATCGGCCTGGTACGGCGTCGACTTCGCCTCCGAGTACGAAAAGCTCTGGGGCCTGAAGTAG
PROTEIN sequence
Length: 407
MDVLKSVRWLVAALAILALGVGVAACGGSSSSSSSGTTSEAAGSTGEESSETSEPSESSASDGVAEAEKLVAAARKPQAFDPPGKPISVSGLKGKTVYDITNQLAVAFEKTLTSNTTEALAKAGIKNVVVQANNEVSQATKLIEQAVAQNADAIIIESFKSDLIAGPLQEAKAAGIPVIDLFEGDPALPTPKQVEQGVAALATFCYSCAGKLMADWVIADSGGEGVHGVTYYSDDLGSSLAVNEGQKDEFARLCPECKVEYKNVQGSQWTTKIPTLTQSDVANPEVNYFIPNFDGMATFMVPAINAAGATERVKLASFNANLPFMEEMQNGGVIKSDVGSPVAWMGWAVADQTMRVMNGEEPLEDVGIPLRMFDESNIGEIDLSEPESAWYGVDFASEYEKLWGLK*