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scnpilot_solids2_trim150_scaffold_275_curated_31

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(33321..34400)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTA6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 347.0
  • Bit_score: 324
  • Evalue 1.10e-85
ABC transporter permease; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 347.0
  • Bit_score: 324
  • Evalue 3.30e-86
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA26324.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 347.0
  • Bit_score: 324
  • Evalue 1.50e-85

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
GTGAGCGAAACCGTTGACAAGCGCCGCACGGGGCCGCAGCCGTCCGTGCCGGCGGAGTCGGCCGCCCCGCGCGGCCCCTCCGGAGGGAGGCGGCGCCGTCCGGACCTCGCCGGCATCGCTGCCTCCTACGGGATCATCTTCGCCTGGGCGGCGGTGATCCTGGTCTTCTCGCTGCTCGAGCCGAGCAAGTTCTTCACCACCGCCAACCTGCAGACGATCCTCGGCTCCCAGTCGGTCCTCCTGATCCTGGCGCTGGGCCTGATCATCTCGCTCAGCGTCGGCGAGTACGACCTCTCCGTCGCCGGGGCGATGTCGGTGTCCCTGGTCCTGGTCGGATACCTGAACGTGGTCGCCGGCTGGGCGATCATCCCGGCGATCCTCGCCGCGCTTCTCTCCGGGGTGCTCGTCGGCGTGCTGAACGCGGCGCTGGTGGTCGGCCTCGGCGTCCAGTCGCTGGTCGCCACCCTCGGCACGGGCACCCTGCTGGTGGGGCTCGGCGTCGCGATCCGGGGCGAAACGACCTCGGGGATCTCCTCCAGCCTGGTGGACGTCATCCGCTACCGGATCATCGGCCTGCCGCTCTCCTTCTACCTCGCGCTGCTCTTCACCGTGATCGTCTGGTACTGCGTCCGGTTCACCCCGCTCGGCCGTTACCTCTACTTCGTCGGCGCGAATCCGAGCGTGGCGAAGCTGTCGGGCCTGCCGGTGAACCGGATCCGGGCGGGAGCCCTGATCGCCACCTCGTTCGTCGGGGCGATGGCGGGGGTCGTCTTCGCCGGCACCCTGGCGGCCTCGGATCCGAACATCAGCGCCTCCTATCTGCTTCCCGCGTTCGCGGCGGCATTCCTCGGCTCGACCGCGATCACGCCCGGTCGGTTCAACGCCTGGGGAACCTTCGTCGCCGTCTACTTCCTGGTCACCGGGATCACCGGCCTGCAGCTGCTCGGGCTCTCCGGCTGGATCGAAGACGTCTTCTACGGCGGTTCGTTGGTGCTCGCCGTGTCCCTGTCCAAATTGGCAGCCAAATACCAGATCTACCGCCGTTCGCGCATCACCCGCTCCGGTGGTGCGCCCGGATAG
PROTEIN sequence
Length: 360
VSETVDKRRTGPQPSVPAESAAPRGPSGGRRRRPDLAGIAASYGIIFAWAAVILVFSLLEPSKFFTTANLQTILGSQSVLLILALGLIISLSVGEYDLSVAGAMSVSLVLVGYLNVVAGWAIIPAILAALLSGVLVGVLNAALVVGLGVQSLVATLGTGTLLVGLGVAIRGETTSGISSSLVDVIRYRIIGLPLSFYLALLFTVIVWYCVRFTPLGRYLYFVGANPSVAKLSGLPVNRIRAGALIATSFVGAMAGVVFAGTLAASDPNISASYLLPAFAAAFLGSTAITPGRFNAWGTFVAVYFLVTGITGLQLLGLSGWIEDVFYGGSLVLAVSLSKLAAKYQIYRRSRITRSGGAPG*