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scnpilot_solids2_trim150_scaffold_2004_curated_9

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(6355..7068)

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma factor n=1 Tax=Rhodococcus opacus RepID=UPI00029CC72E similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 234.0
  • Bit_score: 116
  • Evalue 3.80e-23
Uncharacterized protein {ECO:0000313|EMBL:AHK32028.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 234.0
  • Bit_score: 116
  • Evalue 5.30e-23
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 218.0
  • Bit_score: 111
  • Evalue 5.00e-22

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGAGGACTGAGGACCACCGCGACTGGAAGCTCTCGCTCGGCGCCTACGCGCTCGGCGACCTGCCGGCGGACGAACGCGCCGCGGTCGCCGCCCACCTCGAGGGCTGCGAGGAGTGCCGCGCCGAGCTGTGCTCGCTGGAAGGGGTCGCGGCGCTGCTGCCGCTCGCCGACCCCGACCGGATCGAGGGACCGGCGGTGCGCCCGCCCGCCGACCTCGGGGCCCGGATCGAGGCGCAGATCGCGGCCGAATCGGCCAGGGAGGGCCGCGTGAGGCGGCGGCGTCGCTTCCGGTTGGGGGTTGGCGGCGCCGTCGCCGCGGCGGCGGTCGCGGCGGTGCTGGCGATCGCGATCCTGCCGCTCGGCGGCGGGGAAAGTTCGCCCGCCCAGCAGGTCAAGTTCGCCTCGCTGCCGAATGGGGTCAGCATCGACGCAACCCTCGAACCCCACGCCTTCGGCACCGAGATCGAGATGTACGTGAGCGGCGTCCGCTCCGGCACCCTCTGCCGCGTCTTCCTGCGCGACGCCCAGGGCCGGACCTACTCGGCGGGCAGCTTCCGCTATCGCTGGGGAGCGGACTCGCACGCCCAGCTCAGCTCGGCGCTCGACCTCTCCCAAGCGAAGGTGGTCGGCGTCCACGCGGGCAACCGGACCTTCACGGCACCGGTCGACCAGGCGACCGCGCTGATCGGTGGGGCGGACTTCGACGCGACGTGA
PROTEIN sequence
Length: 238
MRTEDHRDWKLSLGAYALGDLPADERAAVAAHLEGCEECRAELCSLEGVAALLPLADPDRIEGPAVRPPADLGARIEAQIAAESAREGRVRRRRRFRLGVGGAVAAAAVAAVLAIAILPLGGGESSPAQQVKFASLPNGVSIDATLEPHAFGTEIEMYVSGVRSGTLCRVFLRDAQGRTYSAGSFRYRWGADSHAQLSSALDLSQAKVVGVHAGNRTFTAPVDQATALIGGADFDAT*