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scnpilot_solids2_trim150_scaffold_1017_curated_11

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 6308..6913

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 332
  • Evalue 1.20e-88
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:KIL97415.1}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 201.0
  • Bit_score: 332
  • Evalue 3.10e-88
3-isopropylmalate dehydratase small subunit n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=LEUD_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 332
  • Evalue 3.70e-88

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Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAACCATTCACCACCCTGACGGGGGTTGCCGCCCCCCTGCCGATGATCAACGTCGATACCGACATGATCATCCCCAAGAACTTCCTGAAAACCATCAAACGCACCGGATTGGGCAAGGCGCTGTTCTTTGAAATGCGCACCAATGCCGACGGCAGCGAAAACCCCGATTTCGTGCTGAACAAGCCGGCCTACCGCAAGGCGCAGATTCTTGTGGCCGGTGAGAATTTCGGCTGCGGGTCGAGCCGGGAGCACGCGCCCTGGGCCTTGCTCGATTTCGGCATCCGCGTGGTGCTGGCCCCGTCTTTCGCCGATATTTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCGATCAAGCTGCCGCAGGAAGACATCGACAAACTGCTGGACGATGCGGAGCGCGGCGCCAATGCGGTGATCACCGTCGATCTGGCGAAGCAGGAAATCCATGGGCCCGATGGCGGTACCATCAACTTTGAGATCGATCCTTTCCGCAAGCAATGCCTGCTGAACGGCTGGGACGATATTGCGCTGACCTTGCGCAACGAAGACAAGATTTCCGCATTTGAGGCACGGCGCAAAGCGCAAACGGCCTGGCTGTAA
PROTEIN sequence
Length: 202
MEPFTTLTGVAAPLPMINVDTDMIIPKNFLKTIKRTGLGKALFFEMRTNADGSENPDFVLNKPAYRKAQILVAGENFGCGSSREHAPWALLDFGIRVVLAPSFADIFYNNCFKNGILPIKLPQEDIDKLLDDAERGANAVITVDLAKQEIHGPDGGTINFEIDPFRKQCLLNGWDDIALTLRNEDKISAFEARRKAQTAWL*