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scnpilot_solids2_trim150_scaffold_1017_curated_15

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(9751..10521)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ84_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 1.20e-59
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 3.80e-60
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS62067.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 1.70e-59

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGGTGGACGGCAAATTGTTGCCCAAGTCAATGTGCGTGAAAATTGACGACGTGTCATCAATCTATACACTGCACCCGATGCTATTGATTGAGGAACAGATGGAACCCGAGCTGATACGGCCGGTGCAGCCCATAGCCGCCAAGGCGCTGGGCAAGCGCGAGAAAACCAAGGAGAAGAACCGGCTTCTGATTCTGGAAGCCGCCCGCCGCGTGTTCGCCGAAATGGGTTATGGCGCCACAACGGTGCGAGACATCATTCGCGAAACCCCGCTCGCGTCCGGCACCTTCTACAACTACTTCAAATCGAAAGAGGAAGTGTTCCAGGCCATCCGGGATGAAAGCGCACTGCGCATCCGGCCCCGCCTGCGTGAGGAGCGGGTGAAGGCGAAGACGATCGAGGAATTCATCTCCGGCACCTTCAGGACCTTTTTCCAGTACGTCTATGACGATCAGGGGAATTTTCAGGCCATTCGCCGCAACCGTACCGATGCGCTGCGCATCCGGATGGATACGCCGGAGATCATCGCCGGTTTCGAGGAACTGCGGGAGGATATCGAGACCGCCATCGCCAATGGGTTGTTTCCGCCGATCAATGCCGACTTCCTGATGGCCGCCATTGTCGGTGTGGCTTTTGAAATCGCCGAACGCATGCTGGCGGAGGAGGGGCGGGATCCGGCGGCGGCTGCAGCCTTCGCCACCGCATTGTTCATGGGTGGGGTCCGCACGCTCCCCCATCGTGTCATGCCGCGGGCAGAGGCAGGTCAGGCATGA
PROTEIN sequence
Length: 257
MVDGKLLPKSMCVKIDDVSSIYTLHPMLLIEEQMEPELIRPVQPIAAKALGKREKTKEKNRLLILEAARRVFAEMGYGATTVRDIIRETPLASGTFYNYFKSKEEVFQAIRDESALRIRPRLREERVKAKTIEEFISGTFRTFFQYVYDDQGNFQAIRRNRTDALRIRMDTPEIIAGFEELREDIETAIANGLFPPINADFLMAAIVGVAFEIAERMLAEEGRDPAAAAAFATALFMGGVRTLPHRVMPRAEAGQA*