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scnpilot_solids2_trim150_scaffold_510_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_510_curated_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(161..1105)
DNA (945bp) protein (315aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase n=1 Tax=Niabella aurantiaca RepID=UPI000365EFF4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_510_curated_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1202..3700)
DNA (2499bp) protein (833aa)
Cytochrome c biogenesis factor n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KV10_SOLCM
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Cytochrome c biogenesis factor {ECO:0000313|EMBL:AFD06010.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_510_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3877..5430)
DNA (1554bp) protein (518aa)
methylmalonyl-CoA mutase large subunit; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEV97370.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEV97370.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
methylmalonyl-CoA mutase n=1 Tax=Segetibacter koreensis RepID=UPI00037E6150
scnpilot_solids2_trim150_scaffold_510_curated_4
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5476..6378)
DNA (903bp) protein (301aa)
Putative MccF-like protein (Microcin C7 resistance) n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YUH6_AEQSU
putative MccF-like protein (microcin C7 resistance)
Putative MccF-like protein (Microcin C7 resistance) {ECO:0000313|EMBL:AFL80644.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_solids2_trim150_scaffold_510_curated_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6436..6879)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM76_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63981.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_510_curated_6
unknown

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comp(6983..7684)
DNA (702bp) protein (234aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_7
unknown

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comp(7880..8134)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_8
unknown

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comp(8162..8392)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_9
unknown

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comp(8581..8778)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_10
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9320..11050
DNA (1731bp) protein (577aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase large subunit n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XT60_9BACT
Acetolactate synthase large subunit {ECO:0000313|EMBL:EMS31692.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
scnpilot_solids2_trim150_scaffold_510_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11114..11623
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT1_NIAKG
hypothetical protein; K06940
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_510_curated_12
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11723..12202
DNA (480bp) protein (160aa)
Type II restriction enzyme id=4904069 bin=GWA2_Ignavibacteria-rel_35_8 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
type II restriction enzyme
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_510_curated_13
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12153..12464
DNA (312bp) protein (104aa)
Type II restriction enzyme id=2207367 bin=GWB2_Ignavibacteria_35_12 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
type II restriction enzyme
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_510_curated_14
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12528..12827
DNA (300bp) protein (100aa)
Putative type II DNA modification enzyme (Methyltransferase) id=4904070 bin=GWA2_Ignavibacteria-rel_35_8 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
DNA methylase N-4/N-6 domain-containing protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_510_curated_15
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12940..13554
DNA (615bp) protein (205aa)
type II DNA modification methyltransferase (EC:2.1.1.72); K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
Putative type II DNA modification enzyme (Methyltransferase) id=2207366 bin=GWB2_Ignavibacteria_35_12 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_510_curated_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13736..16591)
DNA (2856bp) protein (952aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
carB; carbamoyl phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
carbamoyl phosphate synthase large subunit n=1 Tax=Niabella aurantiaca RepID=UPI0003613024
scnpilot_solids2_trim150_scaffold_510_curated_17
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

16763..17932
DNA (1170bp) protein (390aa)
Glycosyl transferase family 2 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S704_PEDSD
family 2 glycosyl transferase
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_510_curated_18
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17937..18566)
DNA (630bp) protein (210aa)
Rare lipoprotein A n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DLW5_DESVM
lipoprotein A; K03642 rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ACL08491.1}; Flags: Precursor;; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
scnpilot_solids2_trim150_scaffold_510_curated_19
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18703..20604)
DNA (1902bp) protein (634aa)
Tetratricopeptide TPR_1 repeat-containing protein id=4879868 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_510_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20750..21112
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036B0983
MerP {ECO:0000313|EMBL:AKD55815.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Heavy metal transport/detoxification protein
scnpilot_solids2_trim150_scaffold_510_curated_21
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(21204..22361)
DNA (1158bp) protein (386aa)
Butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_510_curated_22
Riptortus pedestris, Riptortus, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(22478..22774)
DNA (297bp) protein (99aa)
Diazepam binding inhibitor, putative n=1 Tax=Riptortus pedestris RepID=R4WIN2_9HEMI
Diazepam binding inhibitor, putative {ECO:0000313|EMBL:BAN20520.1}; TaxID=329032 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Pentatomomorpha; Coreoidea; Alydidae; Riptortus.;" source="Riptortus pedestris.;"
acbp-1; Acyl-Coenzyme A Binding Protein family member (acbp-1)
scnpilot_solids2_trim150_scaffold_510_curated_23
unknown

Not on your lists

comp(23050..23547)
DNA (498bp) protein (166aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_24
unknown

Not on your lists

comp(23927..24403)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_25
unknown

Not on your lists

24582..24677
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_510_curated_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(24981..25640)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003807EE4
LuxR family two component transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_510_curated_27
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(25691..27565)
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FC98B
tetratricopeptide repeat protein,histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_510_curated_28
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

27881..29455
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PLX6_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33794.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
scnpilot_solids2_trim150_scaffold_510_curated_29
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

29471..30415
DNA (945bp) protein (315aa)
OmpA/MotB domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBY8_RUNSL
OmpA/MotB domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_510_curated_30
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30513..31163
DNA (651bp) protein (217aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgono
Octanoyltransferase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X4L5_9PORP
lipoate-protein ligase B
Displaying items 1-30 of 34 in total

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