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scnpilot_solids2_trim150_scaffold_465_curated

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_465_curated_1
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

3..2972
DNA (2970bp) protein (990aa)
Cell surface protein id=4524243 bin=GWF2_Bacteroidetes_38_335 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
PKD domain-containing protein
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_465_curated_2
unknown

Not on your lists

comp(3052..3225)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_3
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3287..3559
DNA (273bp) protein (91aa)
Transposase-like protein n=4 Tax=Riemerella anatipestifer RepID=F0TKA7_RIEAR
transposase-like protein
Uncharacterized protein {ECO:0000313|EMBL:AFD55389.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_solids2_trim150_scaffold_465_curated_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(3999..6827)
DNA (2829bp) protein (943aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003770C0F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_465_curated_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

6996..7997
DNA (1002bp) protein (334aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTG4_HALH1
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_465_curated_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7998..11330)
DNA (3333bp) protein (1111aa)
Protein translocase subunit SecA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV90_CHIPD
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_465_curated_7
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11455..11886
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K9F2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ELR80206.1}; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_465_curated_8
unknown

Not on your lists

11975..12109
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_9
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12054..12869
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZZ6_9FLAO
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_465_curated_10
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12929..14944
DNA (2016bp) protein (672aa)
Outer membrane receptor (OMR) family transporter n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYN7_9FLAO
Outer membrane receptor (OMR) family transporter {ECO:0000313|EMBL:ESU19601.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
outer membrane receptor (OMR) family transporter; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_465_curated_11
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14987..15544)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Ureibacillus thermosphaericus RepID=UPI00030AD17F
Uncharacterized protein {ECO:0000313|EMBL:KFF04616.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_465_curated_12
unknown

Not on your lists

15605..15766
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_13
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(15699..16073)
DNA (375bp) protein (125aa)
Transcriptional regulator, DeoR n=1 Tax=Bacillus cereus AH603 RepID=C2XUI0_BACCE
hypothetical protein
Tax=RBG_16_Zixibacteria_43_9_curated
scnpilot_solids2_trim150_scaffold_465_curated_14
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16378..17373
DNA (996bp) protein (332aa)
Putative lysophospholipase n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UIT9_9LEPT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
scnpilot_solids2_trim150_scaffold_465_curated_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17494..18363
DNA (870bp) protein (290aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWS5_HALH1
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:AEE52558.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_465_curated_16
unknown

Not on your lists

comp(18341..18508)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_17
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18909..19283
DNA (375bp) protein (125aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5L7_9FLAO
Acriflavine resistance protein B {ECO:0000313|EMBL:KFF00661.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_solids2_trim150_scaffold_465_curated_18
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19417..20043)
DNA (627bp) protein (209aa)
D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72]
methyltransferase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B33CA
Uncharacterized protein {ECO:0000313|EMBL:BAR50228.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
scnpilot_solids2_trim150_scaffold_465_curated_19
unknown

Not on your lists

comp(20214..21356)
DNA (1143bp) protein (381aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_20
unknown

Not on your lists

comp(21367..21936)
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_21

Not on your lists

comp(21933..22790)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZMF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN24449.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_465_curated_22
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22803..23195)
DNA (393bp) protein (131aa)
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_solids2_trim150_scaffold_465_curated_23
unknown

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comp(23212..23637)
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_24
unknown

Not on your lists

comp(23637..24161)
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_25
unknown

Not on your lists

comp(24201..24515)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_465_curated_26
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24512..24823)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:AHJ98925.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
scnpilot_solids2_trim150_scaffold_465_curated_27
Porphyromonas catoniae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24823..25389)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5PI77_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EWC93256.1}; TaxID=887901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas catoniae ATCC 51270.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_465_curated_28
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25386..26348)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HHB0_BACT4
Uncharacterized protein {ECO:0000313|EMBL:AHJ98928.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
phage protein D
scnpilot_solids2_trim150_scaffold_465_curated_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26341..27006)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAW9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30002.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_465_curated_30
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27010..28665)
DNA (1656bp) protein (552aa)
Putative tape measure domain protein n=1 Tax=Prevotella sp. CAG:474 RepID=R6W413_9BACT
Putative tape measure domain protein {ECO:0000313|EMBL:CDC98926.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
tape measure domain protein
Displaying items 1-30 of 43 in total

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