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scnpilot_solids2_trim150_scaffold_192_curated

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_192_curated_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

343..930
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCJ9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30677.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_192_curated_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

927..1091
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFJ4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45708.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_192_curated_3
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

1099..1632
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EPI7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM44776.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
sugar transferase
scnpilot_solids2_trim150_scaffold_192_curated_4
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1616..4441
DNA (2826bp) protein (942aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISG7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN82224.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_192_curated_5
unknown

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4920..5240
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_192_curated_6
unknown

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5406..5954
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_192_curated_7
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5979..6506)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BV21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80436.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_192_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6640..8154)
DNA (1515bp) protein (505aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Lysine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD7_NIAKG
scnpilot_solids2_trim150_scaffold_192_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8303..9340
DNA (1038bp) protein (346aa)
tetraacyldisaccharide 4'-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380DEDD
scnpilot_solids2_trim150_scaffold_192_curated_10
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9340..10164
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
purine nucleoside phosphorylase I; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase n=1 Tax=Prevotella sp. CAG:279 RepID=R7HSD4_9BACT
scnpilot_solids2_trim150_scaffold_192_curated_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

10161..12116
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B2522
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_192_curated_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12127..13371)
DNA (1245bp) protein (415aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEC6_CHIPD
Fis family transcriptional regulator
Putative Fis family transcriptional regulator {ECO:0000313|EMBL:GAO44374.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_192_curated_13
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13543..14007
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R414_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV32046.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_192_curated_14
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14139..15272
DNA (1134bp) protein (378aa)
FAD binding domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYL6_9FLAO
Monooxygenase {ECO:0000313|EMBL:GAL87400.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
2-polyprenyl-6-methoxyphenol hydroxylase related FAD-dependent oxidoreductase
scnpilot_solids2_trim150_scaffold_192_curated_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15485..15835
DNA (351bp) protein (117aa)
Ribosome-binding factor A id=4063940 bin=GWF2_Bacteroidetes_41_31 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_solids2_trim150_scaffold_192_curated_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

15876..17705
DNA (1830bp) protein (610aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNV5_CHIPD
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_192_curated_17
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17718..18941
DNA (1224bp) protein (408aa)
Putative uncharacterized protein id=2179382 bin=GWE2_Bacteroidetes_42_24 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids2_trim150_scaffold_192_curated_18
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

19005..19604
DNA (600bp) protein (200aa)
Cysteine-rich secretory family protein id=1992268 bin=GWE2_Spirochaete_31_10 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Tax=GWE2_Spirochaetes_31_10_curated
scnpilot_solids2_trim150_scaffold_192_curated_19
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19678..20445
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L595_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KGE87985.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_192_curated_20
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(20463..21212)
DNA (750bp) protein (250aa)
Thioredoxin family protein id=4154310 bin=GWF2_Bacteroidetes_33_38 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Thioredoxin domain-containing protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_192_curated_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(21277..22713)
DNA (1437bp) protein (479aa)
beta-glucosidase; K05350 beta-glucosidase [EC:3.2.1.21]
Beta-glucosidase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BF76_ZUNPS
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_192_curated_22
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22798..23598)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z9Y3_BELBD
short-chain dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFL86051.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_solids2_trim150_scaffold_192_curated_23
unknown

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comp(23595..24047)
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_192_curated_24
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

24179..27361
DNA (3183bp) protein (1061aa)
hypothetical protein id=127763 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
scnpilot_solids2_trim150_scaffold_192_curated_25
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

27362..29467
DNA (2106bp) protein (702aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XBR8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
scnpilot_solids2_trim150_scaffold_192_curated_26
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29543..30883
DNA (1341bp) protein (447aa)
Putative amino acid transporter n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L4G7_SAPGL
putative amino acid transporter
Putative amino acid transporter {ECO:0000313|EMBL:AFC22846.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids2_trim150_scaffold_192_curated_27
unknown

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30899..32284
DNA (1386bp) protein (462aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_192_curated_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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comp(32295..33296)
DNA (1002bp) protein (334aa)
Putative surface layer protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EC19_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_192_curated_29
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33262..34458)
DNA (1197bp) protein (399aa)
sugar phosphate nucleotydyl transferase (EC:2.7.7.-)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030546AF
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_solids2_trim150_scaffold_192_curated_30
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34491..36029)
DNA (1539bp) protein (513aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R691_OWEHD
Displaying items 1-30 of 76 in total

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