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scnpilot_solids2_trim150_scaffold_120_curated

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_120_curated_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2..298
DNA (297bp) protein (99aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_120_curated_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

268..885
DNA (618bp) protein (206aa)
YceI family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIE0_RUNSL
YceI family protein
YceI family protein {ECO:0000313|EMBL:AEI51483.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_120_curated_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(901..3081)
DNA (2181bp) protein (727aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037260C6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_120_curated_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


3286..3543
DNA (258bp) protein (86aa)
50S ribosomal protein L28 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXZ1_HALH1
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_120_curated_5
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists


3566..3754
DNA (189bp) protein (63aa)
50S ribosomal protein L33 id=3501156 bin=GWF2_Bacteroidetes_29_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
ribosomal protein L33, bacterial type
Tax=CG_Bacteroid_02
scnpilot_solids2_trim150_scaffold_120_curated_6
unknown

Not on your lists

3775..3942
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_120_curated_7
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4004..4957
DNA (954bp) protein (318aa)
Signal recognition particle receptor FtsY n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I1Z4_9BACE
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
scnpilot_solids2_trim150_scaffold_120_curated_8
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4971..6227)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEK7_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY51897.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_120_curated_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6534..9203
DNA (2670bp) protein (890aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC91572.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein id=7718348 bin=BACIGN_2 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
collagen triple helix repeat-containing protein
scnpilot_solids2_trim150_scaffold_120_curated_10
unknown

Not on your lists

comp(9419..9568)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_120_curated_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9620..10978
DNA (1359bp) protein (453aa)
glutamate--ammonia ligase; K01915 glutamine synthetase [EC:6.3.1.2]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B5EC4
Glutamine synthetase {ECO:0000313|EMBL:ETZ20535.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_120_curated_12
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11321..11983)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2V5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGO09919.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_13
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12129..13055)
DNA (927bp) protein (309aa)
Putative uncharacterized protein id=2012477 bin=GWE2_Bacteroidetes_42_42 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_120_curated_14
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13067..15007)
DNA (1941bp) protein (647aa)
Outer membrane protein, peptidoglycan-associated lipoprotein id=4342215 bin=GWF2_Bacteroidetes_43_63 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
OmpA/MotB domain-containing protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_120_curated_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(15032..20374)
DNA (5343bp) protein (1781aa)
hypothetical protein
CHU large protein; candidate b-glycosidase, glycoside hydrolase family 9 protein id=4395318 bin=GWF2_Bacteroidetes_35_48 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_16
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20527..20868
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZRA5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY26995.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_120_curated_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

20819..21454
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003624B0D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(21465..23165)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003760D31
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids2_trim150_scaffold_120_curated_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(23197..25152)
DNA (1956bp) protein (652aa)
Fibronectin type III domain protein id=4653731 bin=GWA2_Ignavibacteria-rel_35_8 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_120_curated_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(25168..30999)
DNA (5832bp) protein (1944aa)
Fibronectin type III domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KCL5_9BACT
fibronectin type III domain protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_120_curated_21
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

31314..32441
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037A1E1D
hypothetical protein; K03932 polyhydroxybutyrate depolymerase
Tax=RBG_16_Ignavibacteria_35_7_curated
scnpilot_solids2_trim150_scaffold_120_curated_22
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32488..34023
DNA (1536bp) protein (512aa)
Putative uncharacterized protein id=2595486 bin=GWF2_Bacteroidetes_38_335 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_120_curated_23
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34386..37772
DNA (3387bp) protein (1129aa)
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:KHJ36610.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KHJ36610.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Pedobacter arcticus RepID=UPI000304627E
ribonucleoside-diphosphate reductase
scnpilot_solids2_trim150_scaffold_120_curated_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38058..38435)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374447A
RNA-binding protein S4 {ECO:0000313|EMBL:KIC90575.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
scnpilot_solids2_trim150_scaffold_120_curated_25
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38432..40822)
DNA (2391bp) protein (797aa)
TonB-dependent receptor plug n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FGW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJF44882.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_120_curated_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(40830..41405)
DNA (576bp) protein (192aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase id=1982141 bin=GWE2_Bacteroidetes_42_39 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_120_curated_27
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41436..42140)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSM9_FLAIG
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_solids2_trim150_scaffold_120_curated_28
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42230..43378
DNA (1149bp) protein (383aa)
putative aminotransferase; K14287 methionine aminotransferase [EC:2.6.1.-]
aminotransferase n=1 Tax=Pedobacter agri RepID=UPI00029A7E8A
Aminotransferase {ECO:0000313|EMBL:KIA88284.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
scnpilot_solids2_trim150_scaffold_120_curated_29
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43382..44050)
DNA (669bp) protein (223aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDB1_CHIPD
scnpilot_solids2_trim150_scaffold_120_curated_30
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44180..44617)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI0002880546
Uncharacterized protein {ECO:0000313|EMBL:ETN96133.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
hypothetical protein
Displaying items 1-30 of 89 in total

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