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scnpilot_solids2_trim150_scaffold_107_curated

Search features with annotation key words

Displaying items 91-120 of 205 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_107_curated_91
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

108291..109721
DNA (1431bp) protein (477aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
glutamate dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037487E2
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
scnpilot_solids2_trim150_scaffold_107_curated_92
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(109800..110855)
DNA (1056bp) protein (352aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KBS9_9BACT
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CCH01582.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids2_trim150_scaffold_107_curated_93
unknown

Not on your lists

111093..112121
DNA (1029bp) protein (343aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_107_curated_94
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(112132..112737)
DNA (606bp) protein (202aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J301_CYCMS
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AEL28297.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_107_curated_95
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

112877..113455
DNA (579bp) protein (193aa)
Putative uncharacterized protein id=2000468 bin=GWE2_Bacteroidetes_42_24 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids2_trim150_scaffold_107_curated_96
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113415..114014)
DNA (600bp) protein (200aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Idiomarina sp. A28L RepID=F7RXM0_9GAMM
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EGN75386.1}; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;"
pnuC; nicotinamide mononucleotide transporter; K03811 nicotinamide mononucleotide transporter
scnpilot_solids2_trim150_scaffold_107_curated_97
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(114015..118907)
DNA (4893bp) protein (1631aa)
Adhesin AidA-related id=3455004 bin=GWF2_Bacteroidetes_38_335 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_107_curated_98
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

119010..119858
DNA (849bp) protein (283aa)
Lipoprotein, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZXR6_9BACT
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
scnpilot_solids2_trim150_scaffold_107_curated_99
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(119938..121386)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000366927E
Uncharacterized protein {ECO:0000313|EMBL:KFD38852.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_100
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(121470..122378)
DNA (909bp) protein (303aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPW8_EMTOG
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AHM59655.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
scnpilot_solids2_trim150_scaffold_107_curated_101
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

122485..124584
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J0P4Q5_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_102
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(124664..126856)
DNA (2193bp) protein (731aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase catalytic region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB8_CHIPD
Glutamine synthetase catalytic region {ECO:0000313|EMBL:ACU59158.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_107_curated_103
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

127074..128240
DNA (1167bp) protein (389aa)
Uncharacterized protein {ECO:0000313|EMBL:BAQ61824.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
scnpilot_solids2_trim150_scaffold_107_curated_104
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

128242..129996
DNA (1755bp) protein (585aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase id=4086974 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_107_curated_105
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

129997..131181
DNA (1185bp) protein (395aa)
id=4439713 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_107_curated_106
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(131185..132324)
DNA (1140bp) protein (380aa)
Radical SAM domain protein id=4087106 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
radical SAM protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_107_curated_107
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

132591..133394
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC93933.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Putative uncharacterized protein id=1871433 bin=GWE2_Bacteroidetes_32_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
serine acetyltransferase, plasmid
scnpilot_solids2_trim150_scaffold_107_curated_108
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

133641..135494
DNA (1854bp) protein (618aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Phytochrome, two-component sensor histidine kinase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DTJ7_9BACT
pas/pac sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_107_curated_109
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

135508..137286
DNA (1779bp) protein (593aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371CAA6
pas/pac sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_107_curated_110
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(137283..138416)
DNA (1134bp) protein (378aa)
rfaG; a-glycosyltransferase (EC:2.4.1.-); K00754 [EC:2.4.1.-]
A-glycosyltransferase, glycosyltransferase family 4 protein id=3979295 bin=GWF2_Bacteroidetes_33_16 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_111
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

138503..139861
DNA (1359bp) protein (453aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC-SAMT-1.;"
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.34)
Hydroxymethylglutaryl-CoA reductase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AQ38_FLELS
scnpilot_solids2_trim150_scaffold_107_curated_112
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(139911..140423)
DNA (513bp) protein (171aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
nbaC; 3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6); K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Pontibacter roseus RepID=UPI00035D0689
scnpilot_solids2_trim150_scaffold_107_curated_113
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

140472..141779
DNA (1308bp) protein (436aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002ED79CE
Dihydrofolate synthase {ECO:0000313|EMBL:KIF28018.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
scnpilot_solids2_trim150_scaffold_107_curated_114
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141821..142213)
DNA (393bp) protein (131aa)
Large-conductance mechanosensitive channel n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YS42_CAPCC
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
Large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_107_curated_115
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(142257..142967)
DNA (711bp) protein (237aa)
Probable transcriptional regulatory protein HMPREF1551_00137 n=1 Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2C6B4_9FLAO
Probable transcriptional regulatory protein HMPREF1551_00137 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1227266 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_116
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(143012..143269)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAE6_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI47484.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_107_curated_117
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(143290..144540)
DNA (1251bp) protein (417aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JRW0_9BACT
scnpilot_solids2_trim150_scaffold_107_curated_118
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(144629..145384)
DNA (756bp) protein (252aa)
phenylacetate-CoA oxygenase subunit PaaI; K02611 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003696A68
Phenylacetate-CoA oxygenase, paai subunit {ECO:0000313|EMBL:AHM62556.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids2_trim150_scaffold_107_curated_119
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(145425..145802)
DNA (378bp) protein (126aa)
phenylacetic acid degradation B; K02610 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB id=7717538 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
phenylacetic acid degradation B; K02610 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
Phenylacetic acid degradation B {ECO:0000313|EMBL:ACU58286.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_107_curated_120
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(145849..146835)
DNA (987bp) protein (329aa)
paaA; phenylacetate-CoA oxygenase subunit PaaA; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
Phenylacetate-CoA oxygenase, PaaG subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJU4_CHIPD
Phenylacetate-CoA oxygenase, PaaG subunit {ECO:0000313|EMBL:ACU58285.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 91-120 of 205 in total

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