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scnpilot_solids2_trim150_scaffold_107_curated

Search features with annotation key words

Displaying items 121-150 of 205 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_107_curated_121
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(146843..147406)
DNA (564bp) protein (188aa)
HTH-type transcriptional repressor KstR2 n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NS84_9BACT
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:EMR04560.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
transcriptional regulator, tetr family
scnpilot_solids2_trim150_scaffold_107_curated_122
unknown

Not on your lists

147508..147612
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_107_curated_123
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(147721..148131)
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=Segetibacter koreensis RepID=UPI00035EBBAF
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_107_curated_124
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(148158..148535)
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Bacteroidales bacterium CF RepID=U5QAD4_9BACT
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_solids2_trim150_scaffold_107_curated_125
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(148543..148659)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=2 Tax=Flavobacteriaceae RepID=C6X1X8_FLAB3
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
scnpilot_solids2_trim150_scaffold_107_curated_126
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(148681..148899)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNA6_9SPHI
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
scnpilot_solids2_trim150_scaffold_107_curated_127
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(149086..150237)
DNA (1152bp) protein (384aa)
SAM-dependent methyltransferase n=1 Tax=Bacteroides propionicifaciens RepID=UPI0003786D1F
SAM-dependent methyltransferase {ECO:0000313|EMBL:AIZ62683.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
putative SAM-dependent methyltransferase
scnpilot_solids2_trim150_scaffold_107_curated_128
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(150268..150924)
DNA (657bp) protein (219aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_129
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(150921..151376)
DNA (456bp) protein (152aa)
pantetheine-phosphate adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZC2_OWEHD
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_107_curated_130
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(151427..152740)
DNA (1314bp) protein (438aa)
30S ribosomal protein S12; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT4_NIAKG
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_107_curated_131
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(152920..153114)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 n=1 Tax=Rudanella lutea RepID=UPI0003802F63
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
scnpilot_solids2_trim150_scaffold_107_curated_132
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153182..155029)
DNA (1848bp) protein (616aa)
High-affinity Fe2+/Pb2+ permease n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R680_OWEHD
high-affinity Fe2+/Pb2+ permease; K07243 high-affinity iron transporter
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:AEV33300.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_107_curated_133
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

155191..156669
DNA (1479bp) protein (493aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRH5_SOLCM
inosine-5''-monophosphate dehydrogenase
scnpilot_solids2_trim150_scaffold_107_curated_134
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(157056..158852)
DNA (1797bp) protein (599aa)
ydiO; acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11P41_CYTH3
Tax=CG_Ignavi_01
scnpilot_solids2_trim150_scaffold_107_curated_135
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(159021..159971)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L727_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52103.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_107_curated_136
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

160397..161308
DNA (912bp) protein (304aa)
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR00_SOLCM
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase {ECO:0000313|EMBL:AFD07146.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_107_curated_137
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

161310..162371
DNA (1062bp) protein (354aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Imtechella halotolerans K1 RepID=I0WH07_9FLAO
scnpilot_solids2_trim150_scaffold_107_curated_138
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

162442..164289
DNA (1848bp) protein (616aa)
carboxylesterase; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Carboxylesterase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSN2_HALH1
scnpilot_solids2_trim150_scaffold_107_curated_139
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


164320..165702
DNA (1383bp) protein (461aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYD2_PEDHD
scnpilot_solids2_trim150_scaffold_107_curated_140
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

165707..166027
DNA (321bp) protein (107aa)
Hydroxysteroid dehydrogenase-like protein 2 n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L4X2_SAPGL
hydroxysteroid dehydrogenase-like protein 2
Hydroxysteroid dehydrogenase-like protein 2 {ECO:0000313|EMBL:AFC25147.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids2_trim150_scaffold_107_curated_141
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

166024..166374
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C0122
methylated-DNA-(protein)-cysteine s-methyltransferase DNA binding protein; K07443 methylated-DNA-protein-cysteine methyltransferase related protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_107_curated_142
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

166433..167332
DNA (900bp) protein (300aa)
Bifunctional protein FolD id=4533195 bin=GWF2_Bacteroidetes_33_38 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_solids2_trim150_scaffold_107_curated_143
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(167329..169443)
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTZ0_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KGE85476.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_144
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

169626..170441
DNA (816bp) protein (272aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Imtechella halotolerans K1 RepID=I0WEC1_9FLAO
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_145
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(170438..171376)
DNA (939bp) protein (313aa)
GSCFA domain protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPK2_9BACT
GSCFA family protein {ECO:0000313|EMBL:GAF03597.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
GSCFA domain-containing protein
scnpilot_solids2_trim150_scaffold_107_curated_146
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(171415..172500)
DNA (1086bp) protein (362aa)
phenylacetate-CoA oxygenase/reductase subunit PaaK; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE id=7716849 bin=BACIGN_2 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
phenylacetate-CoA oxygenase/reductase subunit PaaK; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_107_curated_147
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(172646..173062)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N9H0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR03912.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_148
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(173096..173443)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANU7_MARSH
FeS assembly SUF system protein {ECO:0000313|EMBL:GAL85049.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_107_curated_149
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173498..175798)
DNA (2301bp) protein (767aa)
penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
Penicillin-binding protein 1C {ECO:0000313|EMBL:AEW01300.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEW01300.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Penicillin-binding protein 1C n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9V6_NIAKG
scnpilot_solids2_trim150_scaffold_107_curated_150
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(175855..177786)
DNA (1932bp) protein (644aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIH7_NIAKG
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEW01793.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 121-150 of 205 in total

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