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scnpilot_solids2_trim150_scaffold_3069_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3069_curated_1
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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127..441
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
L-rhamnose mutarotase; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000380088D
scnpilot_solids2_trim150_scaffold_3069_curated_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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546..1820
DNA (1275bp) protein (425aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EC72_RUNSL
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEI47603.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_3069_curated_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1908..3305
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F0E55
carbohydrate kinase FGGY
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACU06073.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_3069_curated_4
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3327..3578
DNA (252bp) protein (84aa)
Putative addiction module antidote protein, CC2985 family n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z2I2_BELBD
Antitoxin ParD1 {ECO:0000313|EMBL:AJW62739.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
putative addiction module antidote protein, CC2985 family
scnpilot_solids2_trim150_scaffold_3069_curated_5
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3571..3804
DNA (234bp) protein (78aa)
plasmid stabilization protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000363DF0C
Plasmid stabilization protein {ECO:0000313|EMBL:KIA96486.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
plasmid stabilization system
scnpilot_solids2_trim150_scaffold_3069_curated_6
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3954..5102
DNA (1149bp) protein (383aa)
L-lactate dehydrogenase (cytochrome); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEM71718.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AEM71718.1};; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
L-lactate dehydrogenase (Cytochrome) n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIA0_MURRD
scnpilot_solids2_trim150_scaffold_3069_curated_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5107..5928)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003738120
periplasmic ATP/GTP-binding protein
Periplasmic ATP/GTP-binding protein {ECO:0000313|EMBL:ACU02677.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_3069_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6182..7522
DNA (1341bp) protein (447aa)
NADH-dependent dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CF9D3
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT95690.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_3069_curated_9
unknown

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comp(7619..7789)
DNA (171bp) protein (57aa)

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Displaying 9 items

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