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scnpilot_solids2_trim150_scaffold_2836_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2836_curated_1
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..1061)
DNA (1059bp) protein (353aa)
elongation factor Tu n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B8279
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
translation elongation factor 1a (ef-1a/ef-tu); K02358 elongation factor Tu
scnpilot_solids2_trim150_scaffold_2836_curated_2
unknown

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comp(1226..1432)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2836_curated_3
unknown

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comp(1722..1925)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2836_curated_4
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2022..2327
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LJQ1_9BACT
ribosomal subunit interface protein
Uncharacterized protein {ECO:0000313|EMBL:EKB50553.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
scnpilot_solids2_trim150_scaffold_2836_curated_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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2851..3816
DNA (966bp) protein (322aa)
amidohydrolase 2 (EC:4.1.1.45); K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FKP1_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_2836_curated_6
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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3904..5166
DNA (1263bp) protein (421aa)
fumarylacetoacetate hydrolase (EC:3.7.1.2)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345DDD6
Fumarylacetoacetase {ECO:0000313|EMBL:KIF30641.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
scnpilot_solids2_trim150_scaffold_2836_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5236..7509
DNA (2274bp) protein (758aa)
Two component regulator propeller n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI4_NIAKG
Two component regulator propeller
Two component regulator propeller {ECO:0000313|EMBL:AEW01972.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2836_curated_8
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7519..8004
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034C69ED
Phenylacetate-CoA oxygenase, paaj subunit {ECO:0000313|EMBL:EJF11037.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
phenylacetate-CoA oxygenase, paaj subunit; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
scnpilot_solids2_trim150_scaffold_2836_curated_9
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7997..9904)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=5 Tax=Mycobacterium tuberculosis RepID=M9UUH2_MYCTU
hypothetical protein
Serine esterase {ECO:0000313|EMBL:AIH42108.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
scnpilot_solids2_trim150_scaffold_2836_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10105..11424)
DNA (1320bp) protein (440aa)
ABC transporter, permease protein, putative n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6V5_DYAFD
ABC transporter permease; K01992 ABC-2 type transport system permease protein
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACT96166.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_2836_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11421..12326)
DNA (906bp) protein (302aa)
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA3_CHIPD
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACU64696.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_2836_curated_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(12355..13074)
DNA (720bp) protein (240aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2836_curated_13
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13071..13331)
DNA (261bp) protein (87aa)
Smr protein/MutS2 id=2477776 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Smr protein/MutS2
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_2836_curated_14
Campylobacter hyointestinalis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(13345..13845)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KEA43940.1}; TaxID=91352 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter hyointestinalis subsp. hyointestinalis.;"
cation diffusion facilitator family transporter id=4379147 bin=GWA2_Bacteroidetes_A19_40_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
cation diffusion facilitator family transporter
scnpilot_solids2_trim150_scaffold_2836_curated_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(14017..14412)
DNA (396bp) protein (132aa)
Protein translocase, SecG subunit n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMX9_SOLCM
protein translocase subunit SecG
Protein translocase, SecG subunit {ECO:0000313|EMBL:AFD09058.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_2836_curated_16
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14417..15304)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMY0_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD09059.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_2836_curated_17
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(15375..15806)
DNA (432bp) protein (144aa)
glycerol 3-phosphate dehydrogenase (nad(p)+) (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TR71_MARTH
Displaying 17 items

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