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scnpilot_solids2_trim150_scaffold_1612_curated_3

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 3921..7316

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 999.99
  • Bit_score: 1324
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 999.99
  • Bit_score: 1284
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWI5_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 999.99
  • Bit_score: 1284
  • Evalue 0.0

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3396
ATGAATAATATTAACGATATACTTGGTGCTTACAAACAGCATCCTCAAATTCTTAAAATTGCTTTTGCACTTCAAGCGCAACAAGCTTCCAATCTATTTGCAAAAGGAATGGTTGGCGCAATGGATACTTTTGTTGCTTCGGGTGTTTTTTTTAATTCTGCCGCAAGCCACTTTTTTATTTTAAATGATAAAGAAGAGGCTGCTTATTTTTTAAATAATCTACAATCGCTACTACCCAAAAAAGATGTTTTATTTTTCCCTGATTCGTTTAAGCGTCCACAGCAATTAGAAGAATTGAACAACAACAATGTGTTGCTGCGAACTGAAACGATTAACCGCATCACTAATCCAAACAGCAGAGCAGAATTAGTGGTAACTTATCCCGAAGCATTGTTTGAAAAAGTAGTGAAAGCCGAAGAGCTGAACAAGCAAACACTTCACATGAAAACGGGCGAAAAATTTGATGTGGATTTTGCCATAGATTTACTGGTAGAATTTGAATTTGAGCGAGTGGATTTTGTGTATGAACCGGGACAGTTTAGTATTCGCGGTGGCATAGTAGATATTTTTTCTTTTGGCAACGAATTTCCATACAGAATAGAACTTTTTGGAAAGGAAATAGAAAGCATCAGAACATTCGATCCTGCTTCTCAACTTTCGCAAAAAAACATTAGCAGTATTAGCATTGTTCCGAATATCCAAACGCATTTTACTAACGAGAAAAAAACTTCTGTGTTTGAGGCGCTGCCTGCAAATACAGTAATTTGGATTAAAAATGGACAAAGCATTTTTGATACACTCGGAACACTTATGAATAAGGCTGAAATACTTTCAAAAAAAGATATTTCTGCTCTTAGCGAAAACAATCCTTTGCGCGAAGGCACGCCCGAAGAAGTATTTCTTACATCGGCAGATTTTACCAACGGAATAAAGAATTTTCATTTAATAGAATTTGGGAAAACTTCTTACTTTAAAGCAGAAGAAGTATTTGAATTTAATGCGCAGCCACAACCTTCTTTCAATAAGAATTTCAACTTGCTTATTGATACATTAAAGCAGAACACTTTAAACGAAACGGCAAATTTTATTTTTGCTGAAAATGCAAAGCAAATCGAACGGTTCTATGCCATTTTTGAAGATCTGAAAGCTAATGTTCAGTTCACTCCAATTTATTCCGGCATCAGTGAAGGTTTTGTAGATTCAGATTCAAAAATTGCTTGCTACACCGACCATCAAATTTTTAACCGATACCACAAATACAACTTGCGACAAGGTTTTTCGGGCGATAAAGCCATGTTGATGAAAACAATTCGGGAGCTAAAGGCAGGAGATTTTGTTACGCATATCGATCATGGTGTTGGAGTATATTCCGGTTTAGAAAAAATTGAAATAAACGGTCAAGCACAAGAAGCAGTTCGCTTAATTTATGCGGGAAACGATATACTTTATGTAGGTATTCAATCGCTACATAAAATTTCAAAGTATGTGGGGAAAGAAGGACAGCCACCGCGTGTAAATAAACTGGGAACCGATACGTGGGCAAACCTGAAAAAGAAGACTAAAAAGAAGATAAAAGAAATTGCTTTCGACCTTATTCAGCTTTATGCAAAACGCAGAACAGCAAAAGGATTTCAGTTTTCGCCCGATGGCTACATGCAAAATGAATTGGAAGCAAGTTTTATTTATGAAGACACACCAGACCAAGCAAAAGCTGCAGAAGATGTAAAGCGCGATATGCAATCGCTTCATCCAATGGATAGATTGGTTTGCGGAGATGTGGGATTTGGAAAAACAGAAGTGGCTGTGCGCGCTGCATTTAAAGCCGCTTGCGATGGAAAACAAGTTGCCGTGTTAGTGCCTACCACTATTTTAGCACTTCAACATTACAAAACATTTAAGGAGCGGTTAAGCGAATTTCCAATAGAAATTGATTATATAAACCGATTTAAAACAGCGAAAGAAAAAACAGAAACACTCAAGCGTTTGCAAGAAGGAAAAACAAATATAATTATTGGCACACACGCTATAATTGGCAAGCGTGTAAAGTTTAAGGATTTAGGTTTATTGGTTATTGATGAAGAGCAAAAATTTGGCGTTGGTGTGAAGGAAACTTTGAAGGAACTGAAAGCCAATATTGATTCGCTAACGCTCACTGCTACGCCAATTCCACGCACTTTGCAGTTTAGCATGATGGGCGCGCGCGACTTGAGCATTATCAATACGCCACCGCCAAATAGGCAAGGTGTGGTTACGGAAGTTCACCCTTTAGATCCTGACGTAATTCGCGAAGCTATAGAGCGCGAAATTTATCGTGGTGGGCAAGTATTCTTTGTACACAACAGAGTAAAAGATATTGCTGAAGTAAAATTGATGTTGCAAAAAATTGTTCCTAAAGTAGATATTGCCGTAGCACACGGACAAATGGAAGGTGAGCAATTGGAAGATGTAATTATGCGCTTCATCAATAGAGAATTTGATGTGTTGCTAAGCACTAATATTATCGAGAGCGGAATTGATATTCAAAATGCAAATACTATAATAATAAACAATGCGCACCAGTTTGGATTAAGCGATTTGCACCAATTGCGCGGTAGAGTTGGCAGAAGCAACAAACAAGCGTTTTGCTATTTGTTTGCACCACCAATGAGCACACTTTCTAAAGAGTCGAAACAGCGCTTAAAAACCATTGAAGAATTTAGCGAATTGGGCAGTGGATTTAATATTGCCATGCGCGATTTAGATATTCGCGGAGCAGGAAATTTATTAGGTGGTGAACAAAGCGGTTTTATTGCTGAAATTGGAATGGAAGTTTACCAAAAAATTTTAGATGAAGCTGTACGGGAATTGAAGGAAACCGACTTTAAAGATTTGTATAAAGAAGAACTTGACCGCACACTTGAATACACCCGCGATTGCGCTATCGAAACCGATTTGGAAATGCTTATTCCTGATGAATATGTAAAAAGCAATAGTGAAAGAATGTTGCTCTATCGCGATTTAAATGAAGTGAAAGACGAAGTAGGATTAGAGAAGTTTAAGACTCAGTTAGCAGATAGATTTGGCAAAGTTCCAACGCAGGTTTTAGAACTTTTTAATGCCGTGCGAATGAAATGGATTGCAACTCATTTGGGGTTAGAACGTATAATTCTTAAAAACAAACAACTAAGATGTTACTTTATAGAAAACCAAAGCGCAACGTTTTATTCATCGCAGACTTTCTCTAAAATTCTTGCCTATGTGCAGCAATATAAAACTGGAATGTATCTACGCGAAACTGAAAAATATTTAGTACTGAATATTGATCATGTATCGTCAATAAAAGCAGCGATGGAGCAACTAAAATTAGTGCAAAATTTTGCAGCAAAAAAACAAGATTCATCTGTTGCAGCATCATAA
PROTEIN sequence
Length: 1132
MNNINDILGAYKQHPQILKIAFALQAQQASNLFAKGMVGAMDTFVASGVFFNSAASHFFILNDKEEAAYFLNNLQSLLPKKDVLFFPDSFKRPQQLEELNNNNVLLRTETINRITNPNSRAELVVTYPEALFEKVVKAEELNKQTLHMKTGEKFDVDFAIDLLVEFEFERVDFVYEPGQFSIRGGIVDIFSFGNEFPYRIELFGKEIESIRTFDPASQLSQKNISSISIVPNIQTHFTNEKKTSVFEALPANTVIWIKNGQSIFDTLGTLMNKAEILSKKDISALSENNPLREGTPEEVFLTSADFTNGIKNFHLIEFGKTSYFKAEEVFEFNAQPQPSFNKNFNLLIDTLKQNTLNETANFIFAENAKQIERFYAIFEDLKANVQFTPIYSGISEGFVDSDSKIACYTDHQIFNRYHKYNLRQGFSGDKAMLMKTIRELKAGDFVTHIDHGVGVYSGLEKIEINGQAQEAVRLIYAGNDILYVGIQSLHKISKYVGKEGQPPRVNKLGTDTWANLKKKTKKKIKEIAFDLIQLYAKRRTAKGFQFSPDGYMQNELEASFIYEDTPDQAKAAEDVKRDMQSLHPMDRLVCGDVGFGKTEVAVRAAFKAACDGKQVAVLVPTTILALQHYKTFKERLSEFPIEIDYINRFKTAKEKTETLKRLQEGKTNIIIGTHAIIGKRVKFKDLGLLVIDEEQKFGVGVKETLKELKANIDSLTLTATPIPRTLQFSMMGARDLSIINTPPPNRQGVVTEVHPLDPDVIREAIEREIYRGGQVFFVHNRVKDIAEVKLMLQKIVPKVDIAVAHGQMEGEQLEDVIMRFINREFDVLLSTNIIESGIDIQNANTIIINNAHQFGLSDLHQLRGRVGRSNKQAFCYLFAPPMSTLSKESKQRLKTIEEFSELGSGFNIAMRDLDIRGAGNLLGGEQSGFIAEIGMEVYQKILDEAVRELKETDFKDLYKEELDRTLEYTRDCAIETDLEMLIPDEYVKSNSERMLLYRDLNEVKDEVGLEKFKTQLADRFGKVPTQVLELFNAVRMKWIATHLGLERIILKNKQLRCYFIENQSATFYSSQTFSKILAYVQQYKTGMYLRETEKYLVLNIDHVSSIKAAMEQLKLVQNFAAKKQDSSVAAS*