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scnpilot_solids2_trim150_scaffold_1612_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1612_curated_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(3..3419)
DNA (3417bp) protein (1139aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUZ8_SOLCM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_1612_curated_2
unknown

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comp(3421..3813)
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1612_curated_3
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3921..7316
DNA (3396bp) protein (1132aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWI5_HALH1
scnpilot_solids2_trim150_scaffold_1612_curated_4
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7339..8010
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036ECE44
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
MgtC/SapB transporter {ECO:0000313|EMBL:ADY52549.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_1612_curated_5
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8157..9398
DNA (1242bp) protein (414aa)
Peptidase U32 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPD2_EMTOG
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:AFK01535.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_1612_curated_6
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9403..9630
DNA (228bp) protein (76aa)
Ferredoxin III n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWN4_9BACT
Ferredoxin III {ECO:0000313|EMBL:ELR73466.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
4fe-4S ferredoxin iron-sulfur binding domaiN-containing protein; K05337 ferredoxin
scnpilot_solids2_trim150_scaffold_1612_curated_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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10429..13686
DNA (3258bp) protein (1086aa)
pepN; aminopeptidase N (EC:3.4.11.2); K01256 aminopeptidase N [EC:3.4.11.2]
Aminopeptidase N n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11V53_CYTH3
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_1612_curated_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13770..14366)
DNA (597bp) protein (199aa)
Collagen triple helix repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9B3_FLUTR
Collagen triple helix repeat-containing protein
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AEA44070.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying 8 items

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