ggKbase home page

scnpilot_solids2_trim150_scaffold_192_curated_54

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 55499..56788

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease component n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11Y40_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 429.0
  • Bit_score: 446
  • Evalue 2.90e-122
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 429.0
  • Bit_score: 446
  • Evalue 9.10e-123
ABC transporter, permease component {ECO:0000313|EMBL:ABG57676.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 429.0
  • Bit_score: 446
  • Evalue 4.00e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1290
ATGCAGAAATTGATTGCCGCCATTTTGAAAGATTGTAAAATCCTGTTTCGCGATAAAGCAGGACTGGCAGTGATGTTTGCCATGCCAATACTTTTGGTGGTGGTGATTTCGAGTATTCAAAATAGTTCGTTTAAGCTGGTAAATGAAAATAAAGTGCCTATGTTTTTAGTGAACAATGATGGGCAAGCGGTGAGCCTTCAATTTATTGAAGGACTAAAGCAAATTGGAATGTTTGAAATATTCCAAAACGATACAGTAGTAAACAGAGCTGATGTTTCAAAAGTGATGTATGAAAAAGATGCCATGGTTGCAGTGGTAATTCCAAAAGGTTTTTCGGAAAATATTAGCGCAAAAGCTTCAAAAATTACAAGTGAAGCACTACAAGCATTAGGTATGGCAAGTGAAGAAAGTGAAACTAAAGTTTCTACCATTAAGCAAGTTCCTGCACTTGAAATGGTTTACNNNNNNNNNATGGAAGAAAGTTTTCGTTTATCAGTGATTGGTGCATTGCAAAGCACACAACAATTTACCGAAAATAAGCAAGTGCTTCAAGCACTTTACAAACAGCTTAGCAACAAGAAATTGCCCGATAGTTTGGAACAAAAAATTCTTGCTTCAAAATCGCAGATAGAACAGTTTCCTGTAGCAAAAGATGGTAGCCGTGCCATACCAAATACTTCGCAGCACAATGTTCCGGCATGGACAATTTTTGCTATGTTTTTTATTGTGGTTACACTTAGTACCAACATTGTGAAAGAAAAAGTGAGTGGAAGTTTTATTCGCTTAAAAACGCTACCTACAAATTATGCGATATTACTGCTTGCCAAGCAAATTACATTTGTGTTGGTTACTATGCTGCAAGCGCTTGTGATTTTTTCTATCGGCTATTATGTTTTTCCGCATATCGGTTTGCCTGCTTTAAATTTTCCTACAAATAAAACCGGCTTAGTACTCGTTACATTTTTTTGTGGCTGGAGTGCGGTAAGCTATGGTTTATTAGTTGGCGTTTTTTCTAAAACAATGGAGCAAGCAATTGGCTTTGGAGCCGTTTCGGTGGTGATTTTAGCCGCTATTGGCGGAGTAATTGTTCCTGCATTCGCCATGCCCGAAACATTAAAATTGCTAATGAAAATATCGCCATTGCATTGGTGTATAGAATCTTATTATGTGTTTTTTTTGCAAAATGGTAGCGTAAAAAATATGATAATGAGTATTTTTCCACTTCTTTTATTCATTATTGCAATGCAAATAGTTTCGTGGACGAAACTGAAAAAAGAAAATTTTGTATAA
PROTEIN sequence
Length: 430
MQKLIAAILKDCKILFRDKAGLAVMFAMPILLVVVISSIQNSSFKLVNENKVPMFLVNNDGQAVSLQFIEGLKQIGMFEIFQNDTVVNRADVSKVMYEKDAMVAVVIPKGFSENISAKASKITSEALQALGMASEESETKVSTIKQVPALEMVYXXXMEESFRLSVIGALQSTQQFTENKQVLQALYKQLSNKKLPDSLEQKILASKSQIEQFPVAKDGSRAIPNTSQHNVPAWTIFAMFFIVVTLSTNIVKEKVSGSFIRLKTLPTNYAILLLAKQITFVLVTMLQALVIFSIGYYVFPHIGLPALNFPTNKTGLVLVTFFCGWSAVSYGLLVGVFSKTMEQAIGFGAVSVVILAAIGGVIVPAFAMPETLKLLMKISPLHWCIESYYVFFLQNGSVKNMIMSIFPLLLFIIAMQIVSWTKLKKENFV*