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scnpilot_solids2_trim150_scaffold_79_curated

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_79_curated_1
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..1347
DNA (1347bp) protein (449aa)
Fibronectin type III domain protein n=2 Tax=Myroides RepID=H1Z8E8_MYROD
Uncharacterized protein {ECO:0000313|EMBL:KIC64307.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
peptidase M4, thermolysin
scnpilot_solids2_trim150_scaffold_79_curated_2
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1499..2728
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037AC2A1
Uncharacterized protein {ECO:0000313|EMBL:AKH93432.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
cyclic peptide transporter
scnpilot_solids2_trim150_scaffold_79_curated_3
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3137..4456
DNA (1320bp) protein (440aa)
Putative two-component system sensor protein histidine kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3I2_FLAB3
two-component system sensor protein histidine kinase
Histidine kinase {ECO:0000313|EMBL:KEY18050.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
scnpilot_solids2_trim150_scaffold_79_curated_4
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4443..4730
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3I1_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08994.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_79_curated_5
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4743..5042
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3I0_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90157.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_6
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5048..5791
DNA (744bp) protein (248aa)
Two-component system response regulator n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3H9_FLAB3
Two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:ACU08992.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_79_curated_7
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6144..7400
DNA (1257bp) protein (419aa)
Modification methylase Eco47II {ECO:0000313|EMBL:CDN75751.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CDN75751.1};; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hpaIIM; Type II modification methyltransferase HpaII (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
HpaIIM protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SBC9_9FLAO
scnpilot_solids2_trim150_scaffold_79_curated_8
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7376..8140)
DNA (765bp) protein (255aa)
Putative type II restriction endonuclease {ECO:0000313|EMBL:CDN75750.1}; EC=3.1.21.4 {ECO:0000313|EMBL:CDN75750.1};; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Probable type II restriction endonuclease id=3035737 bin=GWF2_Lentisphaerae_38_69 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
scnpilot_solids2_trim150_scaffold_79_curated_9
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8382..10154)
DNA (1773bp) protein (591aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid--CoA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6I1_FLAB3
AMP-dependent synthetase {ECO:0000313|EMBL:KIA83384.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
scnpilot_solids2_trim150_scaffold_79_curated_10
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10289..11431
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase domain-containing protein n=4 Tax=Riemerella anatipestifer RepID=E4T985_RIEAD
Acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFD55585.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_solids2_trim150_scaffold_79_curated_11
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11507..11758
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA86096.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_79_curated_12
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11962..13638
DNA (1677bp) protein (559aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Formate--tetrahydrofolate ligase n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LXX0_9FLAO
formate-tetrahydrofolate ligase
scnpilot_solids2_trim150_scaffold_79_curated_13
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13834..14430
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X685_FLAB3
Membrane protein {ECO:0000313|EMBL:KIA83565.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_14
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14527..15579
DNA (1053bp) protein (351aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
Glucokinase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJV9_9FLAO
Glucokinase {ECO:0000313|EMBL:KFE97440.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_solids2_trim150_scaffold_79_curated_15
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15741..16337
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LXT3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB61680.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_16
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16342..17043
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7I2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF74266.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_17
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17098..18516
DNA (1419bp) protein (473aa)
L-serine dehydratase (EC:4.3.1.17); K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine dehydratase {ECO:0000313|EMBL:ACU07919.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ACU07919.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
L-serine dehydratase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X681_FLAB3
scnpilot_solids2_trim150_scaffold_79_curated_18
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18639..19013)
DNA (375bp) protein (125aa)
Uncharacterized protein n=5 Tax=Riemerella anatipestifer RepID=E4TE23_RIEAD
Uncharacterized protein {ECO:0000313|EMBL:KIA83559.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_19
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(19014..20207)
DNA (1194bp) protein (398aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1]
Putative alanine dehydrogenase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7G5_9FLAO
Alanine dehydrogenase {ECO:0000313|EMBL:BAP30563.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
scnpilot_solids2_trim150_scaffold_79_curated_20
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20243..20653)
DNA (411bp) protein (137aa)
Uncharacterized protein family UPF0079, ATPase n=4 Tax=Riemerella anatipestifer RepID=E4TE25_RIEAD
ATPase {ECO:0000313|EMBL:KEY19412.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
ATPase; K06925 UPF0079 ATP-binding protein
scnpilot_solids2_trim150_scaffold_79_curated_21
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20695..22647
DNA (1953bp) protein (651aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-]
DNA primase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X675_FLAB3
scnpilot_solids2_trim150_scaffold_79_curated_22
unknown

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22601..22747
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_79_curated_23
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22711..23394
DNA (684bp) protein (228aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X674_FLAB3
scnpilot_solids2_trim150_scaffold_79_curated_24
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23470..24231)
DNA (762bp) protein (254aa)
Triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Triosephosphate isomerase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X673_FLAB3
scnpilot_solids2_trim150_scaffold_79_curated_25
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24274..24624)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJT8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF29072.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_26
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24635..25714)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI0003770713
Doxx family protein {ECO:0000313|EMBL:KIA83553.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_27
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25725..26300)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T4N1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEJ69759.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_28
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26409..27245
DNA (837bp) protein (279aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJX6_9FLAO
scnpilot_solids2_trim150_scaffold_79_curated_29
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27258..27539)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7E6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA83551.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_79_curated_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27599..30166
DNA (2568bp) protein (856aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEU8_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24365.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
Displaying items 1-30 of 135 in total

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