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scnpilot_solids2_trim150_scaffold_38_curated_25

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 25658..26152

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F6_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 164.0
  • Bit_score: 292
  • Evalue 3.50e-76
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 164.0
  • Bit_score: 292
  • Evalue 1.10e-76
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KIA89031.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 164.0
  • Bit_score: 292
  • Evalue 2.90e-76

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Taxonomy

Chryseobacterium jeonii → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 495
TTGGTTTCCAAAGAAAAAGAATTTTCCCAACTCATTAAAGAACATCAAGGGTTGATTATCAAGGTTTCCCGTCTCTATACCAACACGCTGGAGGACGAAGAAGATCTTTTTCAGGAAATCGTGTTACAATTATGGCGCAGCTACGACACATTCAAAGGAGGAAGTAAAATATCGACTTGGATGTACAGAGTAGCACTCAATACCGCTATTACCCTGTTCCGAAAAAAAACCAGATCTCCCCAAACTGATGAACTGAAGGATTTTCATCATAAAGATTTCATAGAAGATGATGATGAGAAACAGCAAAAAGTTTCCCTGCTGTATAAAGTCATTAAAATGCTGCCAAGAGTAGAACGGGCTATTGTGATGATGTATCTGGACGATCTTCCGTATCGTGATATTGCTGAAAACCTGGGAATCAGCGAAGTAAATGCACGGGTGAAGATGAACCGGCTAAAAAAAACACTAAAAGAACTGATGGAAAAACATGCCTGA
PROTEIN sequence
Length: 165
LVSKEKEFSQLIKEHQGLIIKVSRLYTNTLEDEEDLFQEIVLQLWRSYDTFKGGSKISTWMYRVALNTAITLFRKKTRSPQTDELKDFHHKDFIEDDDEKQQKVSLLYKVIKMLPRVERAIVMMYLDDLPYRDIAENLGISEVNARVKMNRLKKTLKELMEKHA*