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scnpilot_solids2_trim150_scaffold_38_curated

Search features with annotation key words

Displaying items 1-30 of 304 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_38_curated_1
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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678..1319
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHX0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KIA83650.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_38_curated_2
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1396..1659)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GD73_LACS5
Uncharacterized protein {ECO:0000313|EMBL:KIA83651.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_38_curated_3
unknown

Not on your lists

2531..2719
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_38_curated_4
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2832..3332)
DNA (501bp) protein (167aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0N8K6_ELIME
scnpilot_solids2_trim150_scaffold_38_curated_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3488..3970)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003767026
Competence/damage-inducible protein CinA
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:ACU07508.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_38_curated_6
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4048..4896
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036A6DE3
Oxidoreductase {ECO:0000313|EMBL:AHW59764.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
aldo/keto reductase (methylglyoxal reductase) DkgB
scnpilot_solids2_trim150_scaffold_38_curated_7
Drosophila willistoni, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

5321..6214
DNA (894bp) protein (298aa)
GK10515 n=1 Tax=Drosophila willistoni RepID=B4NLW8_DROWI
GK10515 gene product from transcript GK10515-RA
GK10515 {ECO:0000313|EMBL:EDW85420.1}; TaxID=7260 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila willistoni (Fruit fly).;"
scnpilot_solids2_trim150_scaffold_38_curated_8
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6332..7855
DNA (1524bp) protein (508aa)
oxidoreductase (EC:1.-.-.-)
Probable oxidoreductase {ECO:0000313|EMBL:ACU07507.1}; EC=1.-.-.- {ECO:0000313|EMBL:ACU07507.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Probable oxidoreductase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X519_FLAB3
scnpilot_solids2_trim150_scaffold_38_curated_9
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7930..9201)
DNA (1272bp) protein (424aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
Serine hydroxymethyltransferase n=4 Tax=Riemerella anatipestifer RepID=E4TA30_RIEAD
Glycine/serine hydroxymethyltransferase
scnpilot_solids2_trim150_scaffold_38_curated_10
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9319..9615
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E3_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89012.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_38_curated_11
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9648..10115
DNA (468bp) protein (156aa)
Regulatory protein RecX n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0A6_FLAB3
Recombinase RecX {ECO:0000313|EMBL:KEY18764.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
RecX family transcriptional regulator; K03565 regulatory protein
scnpilot_solids2_trim150_scaffold_38_curated_12
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10131..11015)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4N5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA89013.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_38_curated_13
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11130..12788)
DNA (1659bp) protein (553aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleotide reductase of class Ia (Aerobic), alpha subunit {ECO:0000313|EMBL:ACU08258.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACU08258.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Ribonucleotide reductase of class Ia (Aerobic), alpha subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E5_FLAB3
scnpilot_solids2_trim150_scaffold_38_curated_14
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12854..13828)
DNA (975bp) protein (325aa)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleotide reductase of class Ia (Aerobic), beta subunit {ECO:0000313|EMBL:ACU08259.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACU08259.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E6_FLAB3
scnpilot_solids2_trim150_scaffold_38_curated_15
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14216..14908
DNA (693bp) protein (231aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KP74_9FLAO
ABC superfamily ATP binding cassette transporter {ECO:0000313|EMBL:BAP33052.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_38_curated_16
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14932..16164
DNA (1233bp) protein (411aa)
Putative ABC transporter n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E8_FLAB3
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY18874.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
ABC transporter; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_38_curated_17
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16196..17467
DNA (1272bp) protein (424aa)
ABC transporter permease protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E9_FLAB3
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFF00332.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_38_curated_18
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17498..18697
DNA (1200bp) protein (400aa)
Membrane fusion efflux protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F0_FLAB3
Membrane fusion efflux protein; K02005 HlyD family secretion protein
Membrane fusion efflux protein {ECO:0000313|EMBL:ACU08263.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_38_curated_19
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18728..19132
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QY42_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR35315.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
scnpilot_solids2_trim150_scaffold_38_curated_20
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19148..19798)
DNA (651bp) protein (217aa)
Putative HD superfamily hydrolase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN62_9FLAO
Phosphohydrolase {ECO:0000313|EMBL:KFF18079.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
HD domain protein; K06950 uncharacterized protein
scnpilot_solids2_trim150_scaffold_38_curated_21
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19800..20642)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8KA38_9FLAO
Alpha/beta hydrolase {ECO:0000313|EMBL:KFC19905.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_38_curated_22
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20663..21301)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4M8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF00318.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
cytoplasmic protein
scnpilot_solids2_trim150_scaffold_38_curated_23
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(21354..23972)
DNA (2619bp) protein (873aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T9R7_9FLAO
scnpilot_solids2_trim150_scaffold_38_curated_24
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24095..24508
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN59_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF13351.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_38_curated_25
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25658..26152
DNA (495bp) protein (165aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F6_FLAB3
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KIA89031.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids2_trim150_scaffold_38_curated_26
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26145..26840
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F7_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08270.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_38_curated_27
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27146..28621)
DNA (1476bp) protein (492aa)
RNA polymerase sigma-54 factor n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN54_9FLAO
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EJL74861.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
RNA polymerase sigma-54 factor rpoN; K03092 RNA polymerase sigma-54 factor
scnpilot_solids2_trim150_scaffold_38_curated_28
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28705..30144)
DNA (1440bp) protein (480aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Asparagine--tRNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F9_FLAB3
scnpilot_solids2_trim150_scaffold_38_curated_29
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30246..30788)
DNA (543bp) protein (181aa)
Ribosome maturation factor RimM n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMT8_9FLAO
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
scnpilot_solids2_trim150_scaffold_38_curated_30
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(30884..31447)
DNA (564bp) protein (188aa)
30S ribosomal protein S16 n=3 Tax=Elizabethkingia RepID=H0KQK0_9FLAO
30S ribosomal protein S16 {ECO:0000313|EMBL:AKH95683.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
SSU ribosomal protein S16p; K02959 small subunit ribosomal protein S16
Displaying items 1-30 of 304 in total

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