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scnpilot_solids2_trim150_scaffold_694_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_694_curated_1
unknown

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_694_curated_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(297..1244)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003608436
Uncharacterized protein {ECO:0000313|EMBL:EDO55676.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_694_curated_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1311..2375)
DNA (1065bp) protein (355aa)
hypothetical protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER70_AMOA5
scnpilot_solids2_trim150_scaffold_694_curated_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2353..4008)
DNA (1656bp) protein (552aa)
hypothetical protein; K00631 glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER69_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE05721.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4135..4578
DNA (444bp) protein (148aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Endoribonuclease YbeY n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=YBEY_AMOA5
hypothetical protein
scnpilot_solids2_trim150_scaffold_694_curated_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4832..5722
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER67_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05719.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5956..6297
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER66_AMOA5
hypothetical protein; K07443 methylated-DNA-protein-cysteine methyltransferase related protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05718.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6545..7840
DNA (1296bp) protein (432aa)
hypothetical protein; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4G3_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACP20881.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_9
unknown

Not on your lists

8026..10131
DNA (2106bp) protein (702aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_694_curated_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(10398..11873)
DNA (1476bp) protein (492aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01571}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01571};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Proline--tRNA ligase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=SYP_AMOA5
scnpilot_solids2_trim150_scaffold_694_curated_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11936..13171)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER63_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05715.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_12
unknown

Not on your lists

comp(13168..13377)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_694_curated_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13409..14677)
DNA (1269bp) protein (423aa)
glyA; serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Serine hydroxymethyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=GLYA_AMOA5
scnpilot_solids2_trim150_scaffold_694_curated_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14787..16652)
DNA (1866bp) protein (622aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER61_AMOA5
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_15
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16952..17512)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSK8_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43660.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scnpilot_solids2_trim150_scaffold_694_curated_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18175..20262)
DNA (2088bp) protein (696aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER94_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE05746.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20677..20808)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERW2_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05964.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21047..21997)
DNA (951bp) protein (317aa)
hypothetical protein; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asi
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERA3_AMOA5
scnpilot_solids2_trim150_scaffold_694_curated_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22679..23704
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERA4_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05756.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23707..26517
DNA (2811bp) protein (937aa)
hypothetical protein; K02335 DNA polymerase I [EC:2.7.7.7]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERA5_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE05757.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids2_trim150_scaffold_694_curated_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26765..27145)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERA6_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05758.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 21 items

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