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scnpilot_solids2_trim150_scaffold_148_curated

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Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_148_curated_1
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

1..324
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICU2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_148_curated_2
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

324..704
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RDN9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_148_curated_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

840..1898
DNA (1059bp) protein (353aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK25_FLUTR
scnpilot_solids2_trim150_scaffold_148_curated_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2074..2232
DNA (159bp) protein (53aa)
Sec-independent protein translocase protein TatA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IED3_FLUTR
Sec-independent protein translocase protein tatA/E-like protein; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_148_curated_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2245..3654
DNA (1410bp) protein (470aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IED4_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3658..5400
DNA (1743bp) protein (581aa)
lytic transglycosylase catalytic subunit; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
Lytic transglycosylase catalytic n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IED5_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5397..6020
DNA (624bp) protein (208aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC66_FLUTR
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_8
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6005..6409)
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Lactoylglutathione lyase and related lyase n=2 Tax=Elizabethkingia anophelis RepID=H0KVA9_9FLAO
Lactoylglutathione lyase {ECO:0000313|EMBL:ELR79537.1}; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
scnpilot_solids2_trim150_scaffold_148_curated_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6406..7206)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC64_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43290.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_148_curated_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7273..8940
DNA (1668bp) protein (556aa)
Extracellular solute-binding protein family 5 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC63_FLUTR
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:AEA43289.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_148_curated_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8951..11410
DNA (2460bp) protein (820aa)
TonB-dependent receptor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC62_FLUTR
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEA43288.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_148_curated_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11527..15051
DNA (3525bp) protein (1175aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RW19_LEAB4
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15142..15792
DNA (651bp) protein (217aa)
Colicin V production protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAM5_FLUTR
Colicin V production protein; K03558 membrane protein required for colicin V production
Colicin V production protein {ECO:0000313|EMBL:AEA43161.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_148_curated_14
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15813..16952
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P1L7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEY18926.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein; K07007
scnpilot_solids2_trim150_scaffold_148_curated_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16984..18072)
DNA (1089bp) protein (363aa)
Lipase class 3 n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KBE2_9BACT
Lipase class 3 {ECO:0000313|EMBL:AKD54272.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
lipase class 3
scnpilot_solids2_trim150_scaffold_148_curated_16
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(18065..19129)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKA7_FLUTR
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_148_curated_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19285..19626)
DNA (342bp) protein (114aa)
Ribosome-binding factor A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKA6_FLUTR
ribosome-binding factor A; K02834 ribosome-binding factor A
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19707..21539
DNA (1833bp) protein (611aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44); K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEA44008.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEA44008.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Xenobiotic-transporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKA5_FLUTR
scnpilot_solids2_trim150_scaffold_148_curated_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21656..24016
DNA (2361bp) protein (787aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKA4_FLUTR
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24028..24693
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID43_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24702..27362)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDD6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42312.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_148_curated_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27474..27776
DNA (303bp) protein (101aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_23
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(27824..29209)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein id=4430018 bin=GWF2_Bacteroidetes_29_10 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Sporulation domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_148_curated_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(29193..30794)
DNA (1602bp) protein (534aa)
Putative uncharacterized protein id=4096465 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_148_curated_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30911..31741
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ43_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(31732..32334)
DNA (603bp) protein (201aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
RibE protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SUG9_9FLAO
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_148_curated_27
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32340..33023)
DNA (684bp) protein (228aa)
Thiamine pyrophosphokinase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ES63_EMTOG
thiamine pyrophosphokinase
Thiamine pyrophosphokinase {ECO:0000313|EMBL:AFK02516.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_148_curated_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33032..33850)
DNA (819bp) protein (273aa)
UspA domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF74_FLUTR
UspA domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_148_curated_29
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33894..36575)
DNA (2682bp) protein (894aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Flavobacterium sp. F52 RepID=J1ACB6_9FLAO
PAS/PAC sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_148_curated_30
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36592..36978)
DNA (387bp) protein (129aa)
Response regulator receiver protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDC7_FLAJ1
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABQ06798.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
Displaying items 1-30 of 112 in total

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