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scnpilot_solids2_trim150_scaffold_83_curated_25

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(30152..30712)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel MscS n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X995_FLACA similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 167.0
  • Bit_score: 148
  • Evalue 5.40e-33
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 167.0
  • Bit_score: 148
  • Evalue 1.70e-33
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:AEW85842.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 167.0
  • Bit_score: 148
  • Evalue 7.60e-33

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Taxonomy

Flavobacterium columnare → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCAGAATTGAATATACAAATTATAAAAACGATAGTCGTCATTCTTTTCTTATCTTTCATAAAAGCGGTCATTTCCCGTTCGATGAGAAAAATCTCCATTAAGATTTTTGAAGGGAATGAACGGAAAAAGAGCATGGACAGGGTATTAAACTTTCTGATCGTTCTGATCGGCTTTATTGTTCTTTCCGTGATCTGGGGAGTTGACCGAAAGGACTTTTTTGTTTTCCTTACTTCCACACTGACAGTTATTGGTGTGGCTTTTTTTGCGCAATGGTCTATTATCTCCAACGTTACAGCAGGCATTGTCGTATTTTTTAATCATCCGATCAGAATCGGTGATAAGATCAGGATTGGTGAGAAAGATTTTTATACGGAAGGTACACTGGATAAGATCTCCTGGTTTTTTATGCACATAACGAATGAAGAAGGAGAAGAAATAACGATTCCCAATAATATTCTGCTTCAAAAATCAGTTCAGATACTGAAAATAAAAAAGCGCGGAAATAGCTTGAATCTGGAAAAACACTATTCCAAACCCTCTGATTTCCCGAAGCTGTAA
PROTEIN sequence
Length: 187
MSELNIQIIKTIVVILFLSFIKAVISRSMRKISIKIFEGNERKKSMDRVLNFLIVLIGFIVLSVIWGVDRKDFFVFLTSTLTVIGVAFFAQWSIISNVTAGIVVFFNHPIRIGDKIRIGEKDFYTEGTLDKISWFFMHITNEEGEEITIPNNILLQKSVQILKIKKRGNSLNLEKHYSKPSDFPKL*