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scnpilot_solids2_trim150_scaffold_83_curated

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_83_curated_1
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEI2_FLUTR
Excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:AEA44521.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(693..1928)
DNA (1236bp) protein (412aa)
FolC bifunctional protein (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein {ECO:0000313|EMBL:AEA44522.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AEA44522.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
FolC bifunctional protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEI3_FLUTR
scnpilot_solids2_trim150_scaffold_83_curated_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1932..2711)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEI5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44524.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2732..3127)
DNA (396bp) protein (132aa)
Outer membrane transport energization protein ExbD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEI7_FLUTR
outer membrane transport energization protein ExbD; K03559 biopolymer transport protein ExbD
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:AEA44526.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3124..3900)
DNA (777bp) protein (259aa)
Outer membrane transport energization protein ExbB n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEI8_FLUTR
outer membrane transport energization protein ExbB; K03561 biopolymer transport protein ExbB
Outer membrane transport energization protein ExbB {ECO:0000313|EMBL:AEA44527.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_6
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4060..5289)
DNA (1230bp) protein (410aa)
Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEJ0_FLUTR
Glu/Leu/Phe/Val dehydrogenase
Glu/Leu/Phe/Val dehydrogenase {ECO:0000313|EMBL:AEA44529.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5327..6397)
DNA (1071bp) protein (357aa)
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEJ1_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_83_curated_8
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

6480..7622
DNA (1143bp) protein (381aa)
Butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEJ2_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_83_curated_9
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7743..8165
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7S4_9FLAO
Thioesterase {ECO:0000313|EMBL:KFF23113.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
thioesterase superfamily protein
scnpilot_solids2_trim150_scaffold_83_curated_10
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8246..10351)
DNA (2106bp) protein (702aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBC6_FLUTR
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_83_curated_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10436..12400)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDX5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44517.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12408..14345)
DNA (1938bp) protein (646aa)
Transglutaminase domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEH9_FLUTR
transglutaminase domain-containing protein
Transglutaminase domain-containing protein {ECO:0000313|EMBL:AEA44518.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_13
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14332..17610)
DNA (3279bp) protein (1093aa)
TPR repeat protein-containing protein {ECO:0000313|EMBL:KGL62697.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
Putative uncharacterized protein id=2159774 bin=GWE2_Bacteroidetes_40_63 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
MORN repeat-containing protein
scnpilot_solids2_trim150_scaffold_83_curated_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17870..18469)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RGJ8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_83_curated_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18836..20737
DNA (1902bp) protein (634aa)
Chaperone protein DnaK n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBY6_FLUTR
Chaperone protein dnaK; K04043 molecular chaperone DnaK
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_83_curated_16
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20844..21314)
DNA (471bp) protein (157aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037C4154
hypothetical protein; K03976 putative transcription regulator
scnpilot_solids2_trim150_scaffold_83_curated_17
unknown

Not on your lists

21508..21801
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_83_curated_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21874..23988)
DNA (2115bp) protein (705aa)
Peptidase S46 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHY0_FLUTR
peptidase S46
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_83_curated_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

24153..24938
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIK7_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_83_curated_20
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25044..25556)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9U7_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43093.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_83_curated_21
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25563..27671)
DNA (2109bp) protein (703aa)
DNA topoisomerase III n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRJ2_SOLCM
DNA topoisomerase III
DNA topoisomerase III {ECO:0000313|EMBL:AFD07517.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_83_curated_22
unknown

Not on your lists

comp(27875..28459)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_83_curated_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28601..29110)
DNA (510bp) protein (170aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=3 Tax=Escherichia coli RepID=D7XH02_ECOLX
scnpilot_solids2_trim150_scaffold_83_curated_24
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(29147..30043)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK50_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_solids2_trim150_scaffold_83_curated_25
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30152..30712)
DNA (561bp) protein (187aa)
Mechanosensitive ion channel MscS n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X995_FLACA
mechanosensitive ion channel MscS
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:AEW85842.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_solids2_trim150_scaffold_83_curated_26
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30851..32560)
DNA (1710bp) protein (570aa)
id=1999954 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_83_curated_27
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32666..33985)
DNA (1320bp) protein (440aa)
AAA+ family ATPase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C5T9_9FLAO
AAA+ family ATPase {ECO:0000313|EMBL:EJL64886.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
ATPase central domain-containing protein
scnpilot_solids2_trim150_scaffold_83_curated_28
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34123..34785)
DNA (663bp) protein (221aa)
DNA-binding response regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DXB7_9FLAO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIX22247.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
two component LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_83_curated_29
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34788..35564)
DNA (777bp) protein (259aa)
Histidine kinase n=1 Tax=Flavobacterium sp. CF136 RepID=J2S5Q7_9FLAO
Histidine kinase {ECO:0000313|EMBL:EJL60547.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
histidine kinase, dimerisation and phosphoacceptor region
scnpilot_solids2_trim150_scaffold_83_curated_30
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35548..36198)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLH1_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10513.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
Displaying items 1-30 of 138 in total

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