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scnpilot_solids2_trim150_scaffold_1983_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1983_curated_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..196)
DNA (195bp) protein (65aa)
Protein-tyrosine-phosphatase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK99_OLICO
ArsR family transcriptional regulator
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AEI08267.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1983_curated_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(189..554)
DNA (366bp) protein (122aa)
Putative transcriptional regulator, ArsR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JK98_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53516.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1983_curated_3
unknown

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comp(822..944)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1983_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(895..4107)
DNA (3213bp) protein (1071aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF85_NITHX
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABE65112.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_1983_curated_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4104..4460)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P158_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32163.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
nitrogen regulatory protein P-II (GlnB, GlnK)
scnpilot_solids2_trim150_scaffold_1983_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5294..6418)
DNA (1125bp) protein (375aa)
Transposase IS1357 n=2 Tax=Rhizobiales RepID=Q50409_METED
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADJ22529.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
scnpilot_solids2_trim150_scaffold_1983_curated_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6968..7276
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LT8_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KJC51608.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1983_curated_8
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8802..9131
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034659F9
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJV09657.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
regulatory protein ArsR; K03892 ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1983_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9118..11898
DNA (2781bp) protein (927aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG94_9BRAD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKS38590.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying 9 items

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