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scnpilot_solids2_trim150_scaffold_33_curated

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_33_curated_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..863
DNA (861bp) protein (287aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FF2_MESSB
TRAP dicarboxylate transporter-DctP subunit
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ABG63873.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_2
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

860..1438
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIT4_MOBAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAS50033.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
scnpilot_solids2_trim150_scaffold_33_curated_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1446..2768
DNA (1323bp) protein (441aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FF0_MESSB
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ABG63875.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2820..3611)
DNA (792bp) protein (264aa)
Probable transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HW2_RHILO
AraC family transcriptional regulator {ECO:0000313|EMBL:EWY41551.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_33_curated_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3728..5008
DNA (1281bp) protein (427aa)
Major facilitator superfamily (MFS) n=1 Tax=Brucella sp. BO2 RepID=E2PP37_9RHIZ
Fosmidomycin resistance protein {ECO:0000313|EMBL:EWY41552.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
fsr; fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein
scnpilot_solids2_trim150_scaffold_33_curated_6
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5015..5707)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FEB2E
Hemolysin III, novel hemolytic factor {ECO:0000313|EMBL:CCV10953.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
putative membrane protein, hemolysin III
scnpilot_solids2_trim150_scaffold_33_curated_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5779..7893)
DNA (2115bp) protein (705aa)
penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003760E01
Penicillin binding protein {ECO:0000313|EMBL:CDX13413.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
scnpilot_solids2_trim150_scaffold_33_curated_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7908..13394)
DNA (5487bp) protein (1829aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGS0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14885.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
alpha-2-macroglobulin domain-containing protein; K06894
scnpilot_solids2_trim150_scaffold_33_curated_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13493..14881)
DNA (1389bp) protein (463aa)
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Rhodovulum sp. PH10 RepID=J5PSH0_9RHOB
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:EJW12902.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
TonB family protein; K03832 periplasmic protein TonB
scnpilot_solids2_trim150_scaffold_33_curated_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14878..15660)
DNA (783bp) protein (261aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GL6_MESSB
ABC transporter related protein {ECO:0000313|EMBL:ABG63459.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_11
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15660..16649)
DNA (990bp) protein (330aa)
Transport system permease protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GL7_MESSB
transport system permease protein; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ABG63458.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_33_curated_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16646..17527)
DNA (882bp) protein (294aa)
Periplasmic binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NVT6_9RHIZ
Periplasmic binding protein {ECO:0000313|EMBL:EKF43465.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_33_curated_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17546..19402)
DNA (1857bp) protein (619aa)
TonB-dependent receptor n=1 Tax=Nitratireductor indicus C115 RepID=K2NZU5_9RHIZ
TonB-dependent receptor {ECO:0000313|EMBL:EKF43464.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_33_curated_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19996..21657
DNA (1662bp) protein (554aa)
Extracellular solute-binding protein family 5 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FA54_9RHIZ
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:CDX44446.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
family 5 extracellular solute-binding protein
scnpilot_solids2_trim150_scaffold_33_curated_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21785..22819
DNA (1035bp) protein (345aa)
UPI0003CF35FC related cluster n=1 Tax=unknown RepID=UPI0003CF35FC
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX13402.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_33_curated_16
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22831..23988
DNA (1158bp) protein (386aa)
Permease protein of dipeptide ABC transporter n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F7K9_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:KFB09649.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_33_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24002..26824
DNA (2823bp) protein (941aa)
ATP-binding protein of dipeptide ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTQ4_9RHIZ
ATP-binding protein of dipeptide ABC transporter {ECO:0000313|EMBL:EHK55890.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein
scnpilot_solids2_trim150_scaffold_33_curated_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26835..27506
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS24_NITHX
hypothetical protein; K06927
Uncharacterized protein {ECO:0000313|EMBL:ABE60973.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_33_curated_19
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

27513..28043
DNA (531bp) protein (177aa)
Putative lipoprotein n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T355_THEA1
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADU96060.1}; Flags: Precursor;; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
scnpilot_solids2_trim150_scaffold_33_curated_20
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28180..29607
DNA (1428bp) protein (476aa)
Putative multidrug resistance protein efflux transporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLH6_MOBAS
Putative multidrug resistance protein efflux transporter {ECO:0000313|EMBL:EAS51755.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
norM; multidrug resistance protein NorM
scnpilot_solids2_trim150_scaffold_33_curated_21
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29637..30227)
DNA (591bp) protein (197aa)
Lytic transglycosylase catalytic n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDN4_MESOW
lytic transglycosylase catalytic subunit
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AEH87908.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_33_curated_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30465..32015
DNA (1551bp) protein (517aa)
trimethylamine methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
UPI0003CF6542 related cluster n=1 Tax=unknown RepID=UPI0003CF6542
Methyltransferase {ECO:0000313|EMBL:ESW88867.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
scnpilot_solids2_trim150_scaffold_33_curated_23
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32100..34526
DNA (2427bp) protein (809aa)
FAD dependent oxidoreductase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4]
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDN6_MESOW
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEH87910.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_33_curated_24
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34523..35203
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FW77_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK78713.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
isochorismatase hydrolase
scnpilot_solids2_trim150_scaffold_33_curated_25
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35556..35957
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Ribonuclease VapC n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZE88_METPB
PilT protein domain-containing protein
scnpilot_solids2_trim150_scaffold_33_curated_26
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36298..36693)
DNA (396bp) protein (132aa)
Putative membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNP6_MESAW
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB45718.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_33_curated_27
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36842..37615)
DNA (774bp) protein (258aa)
Glyoxalase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FED7_9RHIZ
Glyoxalase {ECO:0000313|EMBL:ESX69501.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
lactoylglutathione lyase family protein
scnpilot_solids2_trim150_scaffold_33_curated_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37647..38126)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RW0_RHOP5
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ABJ05324.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_33_curated_29
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38297..39664
DNA (1368bp) protein (456aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Hoeflea sp. 108 RepID=UPI000377AA23
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADV12210.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_33_curated_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39901..40131)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J8D3_METBM
Uncharacterized protein {ECO:0000313|EMBL:KIZ39542.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
Displaying items 1-30 of 237 in total

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